Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_10250 |
Symbol | |
ID | 8394916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1167892 |
End bp | 1170096 |
Gene Length | 2205 bp |
Protein Length | 734 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644985783 |
Product | DNA internalization-related competence protein ComEC/Rec2 |
Protein accession | YP_003143409 |
Protein GI | 257063737 |
COG category | [R] General function prediction only |
COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein [TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.215433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000811582 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCAGACGA TATCTGCGTC TGAGGCGCGT GCTGCGGCAG GAGTCGAGCC CGGCTTCCAA AAACCCTTCC TTCCTCCAAC CGCATATGTT GCGGCAGGGC TTTGGCTTGC AATCCTGGTC GGATTGGGCT TGTACCTGTC ATGTCTGCAG GGTGAAGGCG TGCCTCAAGG CCTTTCGCCG GGTGAGCGGA CCTTCACGCT TGAGCAGGAC GCCAAACGGA CCGAGTTCGG ATGGCATGCC GTGGCCACGG TCCGAGACGA TGCGGGCAAA AGCCGCCGGG TGCAGGTGTC CTTTGACGAT TGCGAGCGGT TTCTGGCTCG GGACAAGGTG GTCTCCTACG CGTTGTTCTC GGAGTTCGAA CCCGACCGCG AGATGCGCTA CCTCCAGCAA GGCGTGTGCG CCCGAGCGCG CCTGACCAGG CCCGACCGAT GCGAACGCAC AGGGTTGACG GGTACGATGC TTTCGGTCCG AGCTTGGTGC ATGGACCGGA TCGAAGCCCG AGACGGCAAA GGTTCGGCTC TGCTCGCGGC CGTGCTTCTG GGGGATCGGC TGCGGCTTGA AGAGGGCGGC CTCTACGACG ACATGAAAGC CGTGGGCATG GCCCACATGG TGGCGGTGTC GGGGGCGCAC CTGTCGGTGG TTTCGGCCTT CGTGATGATG GTCCTGAAGC GGATCGGCAT GCCGAAAAGG GCGGTCGTCT GCGTCATCAT GGGATTCTTT GCGGCATATG CCCTGTTCAC GGGGATGTCC ATACCGGTGC TTCGGGCAGC GCTCATGTCA TCGGTGCTCA TCGGGGCCGT CTGGGGCGGA AGGCGTGGCT CGCCTCTGGC GGCGCTTTCG GTGTGCGTCT GCCTGCTGCT GGCTGCAAAC CCTTACAACG CCTTCTCGCT GTCGTTCCTG CTCTCGGTGG GCTCGACGTT GGGAATCATC CTGTTCACAG GGCTTTTCGA GACGTGGCTT GGCAAGGCTT TAGGCGGAAG GTTTCCCACG GTGTGCAACA CGGTGGCCTT GACCATGGCT GCCAATCTGG TGATCTTTCC AGTGGTGGCA TCGGTATTCG CCCGGCTGCC CCTGCTATCG CCCGTGGCGA ACCTGATTGC GGCGCCGGTG TTCTCGGTGC TGCTCATCGG GGGCCTGGCC GCGCTCGCGC TGTGTGCGGC GGCGCCTCCC TTGGGGTCTT TGGCGCTTGC GGTGTGCGCA GGTGCGGCGG ATTTGTTCTG TTCGATCATG CATGCGTTGG CCCAAGTACC CTATGCAAGC CTGTTCAGCA GCTGGTCGGC GGGCGCTTCG ACGGCCGTTT CGGTGGCGCT CATGGCCCTC ATATGGAGGG TTTGGCCCAA CCCCCGTGCG AAAACGGTTC GCCGCGCGCT GTGCGCTGCG GCTGCGGCGC TGCTCGTGTT CTTGCTTGTC GCCCCTCACA TGGCCGGGGA CGAGATCGTC ATGCTGGACG TAGGGCAGGG GGACGCCTTC CTCATCCGTA GCCAGGGGAG GACGCTTCTG GTGGACACGG GCAACCAGGA GACCATGCTG TCCCAGGCGC TTGCACGGCA TGGGGCCAAC CGGCTGGACG CGTTGCTGGT GTCCCACCAC GATGATGACC ACTACGGTTC GCTTCCCGTC TTGAAATCCG CCCTTGCCGG CGGTAAGGTG TACGTGGCCC GCGAGACCTT CACGACGGAG GACAGGAACA ACGACCTGCT TCTGGAAGCC GCCAAGCAGA CGGTGGGCGC CGACGATGTG CGCGGCCTGT CGTTCGGCGA CGTGCTGCAG GTGGGGCGGT TCACCTGCAC GGTCGTGTGG CCCCATGCGT TTTGCGACAA GGGAGGCAAC GCCGACAGCC TGTGTCTGCG GGTGGAATAC GACGGGGACG GCGACGGTTC CTGCGATTTC ACGGCGCTGT TCACAGGCGA CGCCGAAGCC GACCAGATTT CCGCCATGGT GGAGGAGGGG ACCGTGGGAG ACATCGATGT GCTGAAAGAA GGGCACCACG GCAGCCGCGC CGGTATGACG CCGGAGTTGG CGTCGGCGCT TCGGCCGGAA GTGGTCCTGA TCAGCGTGGG TGCTGACAAC GATTACGGGC ATCCCGCGCC CGAGACTGTC GAGACGCTGG AGGCTGCGGG CGCCCAGGTG TTCCGCACCG ATGAAAATGG AGATGTGTCT TGCAGGTTCC GTGCCAACAC CCTCGAAGTG CGCGCAATGC GCTAG
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Protein sequence | MQTISASEAR AAAGVEPGFQ KPFLPPTAYV AAGLWLAILV GLGLYLSCLQ GEGVPQGLSP GERTFTLEQD AKRTEFGWHA VATVRDDAGK SRRVQVSFDD CERFLARDKV VSYALFSEFE PDREMRYLQQ GVCARARLTR PDRCERTGLT GTMLSVRAWC MDRIEARDGK GSALLAAVLL GDRLRLEEGG LYDDMKAVGM AHMVAVSGAH LSVVSAFVMM VLKRIGMPKR AVVCVIMGFF AAYALFTGMS IPVLRAALMS SVLIGAVWGG RRGSPLAALS VCVCLLLAAN PYNAFSLSFL LSVGSTLGII LFTGLFETWL GKALGGRFPT VCNTVALTMA ANLVIFPVVA SVFARLPLLS PVANLIAAPV FSVLLIGGLA ALALCAAAPP LGSLALAVCA GAADLFCSIM HALAQVPYAS LFSSWSAGAS TAVSVALMAL IWRVWPNPRA KTVRRALCAA AAALLVFLLV APHMAGDEIV MLDVGQGDAF LIRSQGRTLL VDTGNQETML SQALARHGAN RLDALLVSHH DDDHYGSLPV LKSALAGGKV YVARETFTTE DRNNDLLLEA AKQTVGADDV RGLSFGDVLQ VGRFTCTVVW PHAFCDKGGN ADSLCLRVEY DGDGDGSCDF TALFTGDAEA DQISAMVEEG TVGDIDVLKE GHHGSRAGMT PELASALRPE VVLISVGADN DYGHPAPETV ETLEAAGAQV FRTDENGDVS CRFRANTLEV RAMR
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