Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_10000 |
Symbol | |
ID | 8394891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1142132 |
End bp | 1144303 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644985759 |
Product | RecG-like helicase |
Protein accession | YP_003143386 |
Protein GI | 257063714 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1200] RecG-like helicase |
TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000812963 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000704574 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAAGACC GCCTCGCTGC AACGCTCGAG CTTGACGCGC CCGTAACCTC GGTTTCGGGT GTGAGCTCGG GCAGGGCAGC GGGGCTTTCT CGTTTGGGGA TCCGCACCGT CCGCGACCTG CTGCAGCACT TCCCGCACCG CTACGTGGAC ATGTCCCGGA TATCCACCAT CGAAGGCGCC GGCATCGGCG ACAGCGTCAC CATCGTGGGC ACCATCCACG AGGTGCGTCT CAAGCGACCT CGGCCGCGCC TCAGCCTGAC CGAAGTCACC ATCGTGGACG GCACAGGCAC CCTTATCGCC ACGTTCTTCC GCCAGCCCTG GATCGCGAAG ACCCTCAAAA CCGGCACCCG TGTCAGCGTC GCCGGCACGC TGGAGTTCAA TTACGGCTAC AAACGCATGA CCGCGCCGTT TTTGGACGTG CTTGAGGACG ACCAAAACCC CATGTCGGGC CAGATCGTGC CCGTGCACCA CGCCACAGGG AAGGTGACGC CGGGCATCAT GCGGCTCATC GTACGCAACG CGGTGGATTC CGCCTGGGGC GCATACGACC CGCTGCCCTT GGAGCTGCGC ACGAAGTACC GCCTGATGAG CCGCTCGAAC GCCTACCGTT CGATCCACTT CCCGCAGGAC ATGCGCGACG TGCATCAGGC CAGGCGCAGG CTCGCCTACG AAGAAGTGCT CATGCTGCAG ATGCACATGC TCATGTCTGC CCGCGACCGC CAGGACGACG GGCCCGCCCA CGAGCATGTC TTCGACGGGC CATATTCCGA AGCGCTCATG AAGGCGCTGC CTTTCTCGCT CACATCCGAC CAGGAACGGG CCGTGGCCGA AATCCAGATG CGCATGGCGC AGCCGAAGGT CATGTCCCAC ATGCTGCTGG GCGACGTGGG CACGGGCAAG ACGGCCGTGG CGGGATTCGC CATCGCAGCC GCCGCCGACG CGCGCTTCCA AACGTTCATG ATGGCGCCCA CCGAGGTGCT GGCAACCCAG TACGCCGCAT CCTTGGGCGG GCTTTTTGAC CAGGCGGGCA TCAGTTGGGC GCTGCTGACG GGTTCCACCC CTGCGGAGGA CCGTGAGGAC ATCCTCATGC GTCTGGCCTC GGGGCATACC GACGTCGTCT TCGGCACCCA TGCGCTTTTG GAAGACGATG TGGTGGCGCA CGACTGCGGG CTGGTCATCA TCGACGAGCA GCAGCGATTC GGCGTCGATC AGCGCAAACG GCTCATCGAG AAGGGCCGCA ACGCCGATGC CCTGTTCATG ACGGCCACGC CCATTCCGCG CACGCTGGCT CTGGCGCTCT ACGGCAATCT GTCGCTGTCG TACCTGCGCC AGGTTCCCTT CGACCGTCCG CCCCGCAAAA CCCAGGTGGT GGATTTCCGC GACCGGGGCA AGGCCTACGA CGCGGCTCTT GCCGCCTGCC GCCGTGGCGA GCAGGTGTAT GTGGTCTGCC CGCTGGTGGG GCAGAAGCGC AAGGCCGACG ACGACAAGAA GAAGGACGAC CGGGACGCCG AGGAAGAGAC GCCTTCCTAC ATCGAGTCCG ACGAGGACAT GCGGCAGGAC GACCAGAAGG CCGCCGAGGC CGAGGCTGCG TTTCTGCAGT CGAAGGTGTT CGCAGACTTC AAGGTGGGGC TGCTCCACGG TCGCATGGAT GCCAAAGCGA AGCATGCTGC CATGGAGGAT TTCCGGGCGG GGCAGACCGA CGTGCTGGTG TGCACCACCG TCATCGAGGT GGGCGTGGAC GTTCCCAACG CCACGGTCAT GATCATCGAA GACGCCGACC GGTTCGGCCT GTCGCAGCTG CACCAGCTGC GCGGGCGCGT CGGGCGTGGG ACGAAGCCGG GCGAGGTGTA CCTGATCGCC GCCACGTCGT CGGAAGACGC GCTGGAGCGC CTGTCGGCCA TGGAGGCCAC CGACGACGGC TTCGAGCTGG CCGAACGTGA CCTGGCGCTG CGCCGTGAGG GCGACATCCT GGGCAACCGG CAGCACGGCG CTTCGGTCCT GCGGCTGGTG AACATCGTGC GTGACGGGAA GCTCATCGAG CTGGCCCACG AAGACGCCGA AGCCCTGCTG GACGCCGACC CCGAATTCGA GACGCCTGCC ATGCAGGCGC TGGTCCACGA GGTGCGGGCG TGGTTCCCGC ATACCGACGA AGATACGACG ATTGGAGGAT GA
|
Protein sequence | MQDRLAATLE LDAPVTSVSG VSSGRAAGLS RLGIRTVRDL LQHFPHRYVD MSRISTIEGA GIGDSVTIVG TIHEVRLKRP RPRLSLTEVT IVDGTGTLIA TFFRQPWIAK TLKTGTRVSV AGTLEFNYGY KRMTAPFLDV LEDDQNPMSG QIVPVHHATG KVTPGIMRLI VRNAVDSAWG AYDPLPLELR TKYRLMSRSN AYRSIHFPQD MRDVHQARRR LAYEEVLMLQ MHMLMSARDR QDDGPAHEHV FDGPYSEALM KALPFSLTSD QERAVAEIQM RMAQPKVMSH MLLGDVGTGK TAVAGFAIAA AADARFQTFM MAPTEVLATQ YAASLGGLFD QAGISWALLT GSTPAEDRED ILMRLASGHT DVVFGTHALL EDDVVAHDCG LVIIDEQQRF GVDQRKRLIE KGRNADALFM TATPIPRTLA LALYGNLSLS YLRQVPFDRP PRKTQVVDFR DRGKAYDAAL AACRRGEQVY VVCPLVGQKR KADDDKKKDD RDAEEETPSY IESDEDMRQD DQKAAEAEAA FLQSKVFADF KVGLLHGRMD AKAKHAAMED FRAGQTDVLV CTTVIEVGVD VPNATVMIIE DADRFGLSQL HQLRGRVGRG TKPGEVYLIA ATSSEDALER LSAMEATDDG FELAERDLAL RREGDILGNR QHGASVLRLV NIVRDGKLIE LAHEDAEALL DADPEFETPA MQALVHEVRA WFPHTDEDTT IGG
|
| |