Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_09990 |
Symbol | |
ID | 8394890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1140480 |
End bp | 1142111 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644985758 |
Product | predicted kinase, dihydroxyacetone kinase |
Protein accession | YP_003143385 |
Protein GI | 257063713 |
COG category | [R] General function prediction only |
COG ID | [COG1461] Predicted kinase related to dihydroxyacetone kinase |
TIGRFAM ID | [TIGR03599] DAK2 domain fusion protein YloV |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000203822 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00000373427 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGAGA TAACTACGAG CAGCGTGCTC AACGCTATTG CTGTGGCTGC AAAGACGCTT GAAAGCCGTA AGGACGAGGT CAACAGGCTC AACGTGTTCC CCGTGCCCGA CGGCGACACC GGCACCAACA TGTCTTTGAC CCTGCAGATG GTGGTCAAGA ACGTTGCCAA GCTTCCCATT GGTTCTACCG GCGCCGAAAT CCGCAAGGCC ATCACCACCG GTGCCCTTAT GGGTGCACGC GGTAACTCCG GCGTCATCAC CTCGCAGATC CTGCGCGGTC TGTGCGAGGG TCTCGAAGGC GTCGAGGAGC TCGACGTCAA CGCCATCGAC TCCGCTCTGG ACAGCGCCCG TACCGTGGCG TTCCAAGCTG TGCGCAAGCC GGTCGAAGGC ACCATCCTCA CCGTCATCAA GGATGCGGCC GCTTCCGCCC GCAAGGCGAA GCGCAAGAAG ATGTCCGTGG AAGACGCCCT GGAAACCGTC GTCAAGGACG CGTACGCTTC CGTCCAGAAC ACGCCTGAGC TGCTGCCGGT CCTGAAAGAG AACGGCGTGG TGGACGCGGG CGGCTACGGT CTGGCCATCC TGCTGGACGC TTTCGTGGCA TCGCTTCTTG GTAAGGAGGG CTTCACCGAG GATGCGATTT CCTTCGCACG CCCCGCACCC AAGGTCGCAA TCGAGCAGAT CGACGACTGG GATCCCGATT CGGCGTTCCG CTACTGCACC GAGTTCTTGG TCCACTCCGA CACCGTCGAC GTGGACGAGG CCAAGGCGTT TTTGCCCACC ATGGGCGACT GCGACCTGAT GGTCGGCATG CATCCCAACT TCAAGGTGCA TGTGCACTCC AACCGTCCCG ACCAGGTGCT GGGATGGTTC CTCGACCATG ACTCCCAGAT TTCCGAGGTC CACGTCCACA ACATGGGCCT GCAGAGCGAA GAGCGCACCG AGAAGATCGA GGCCGAACGC GCCGCCGAGC ACAAGACCGT CGGCATCGTC GCCGTGGCTC CGGGCTCCGG CAACGCCAAG ATTCTGGAAT CCCTCGGCGT GGACGTCGTC GTCTCCGGCG GCCAGACCAT GAACCCCTCC ACGGCGGATC TGCTGGAGGC TGCCAACAAG GTCAACGCCG ACCAGGTCAT CATCATGCCG AACAACAGCA ACATCGTCAT GGCCGCCCAG GCTGCCTGCC AGGTCTCCGA GAAACCCTGC ATCGTGGTTC CCACCAAGAC CGTCCCGCAG TCCTTCAGCG CCATGTTCGG CTTCAATCCC GAAGCCACCT TGGAGGAGAA CGCCGAGGCC ATGGCCGAGG CATTCGCCGA CACCAAGACC GGCGAAGTGA CCCATGCCAT CAAAGATTCC AAGGACGCCC ATGGCAACCC CATCAAGAAC GGGGACGTCA TCGGCATCGC CGACGGCTCC ATCGAGTGCG TGGGTTCCTC TCTGGAAGAT GTGGTTCTGG ACCTGCTTGA AGTCATGGAG GCTGACGACG CCGACACTGC CACCATCCTG GCCGGTGCCG ACTACTCCGA CGAGGAGCTC GAAGCCCTGG TCGCCCGCAT CGAAGAGACC TACGAGGACC TCGAGGTCGA GTCCCACCGC GGCGAGCAGC CGCTGTACCC GATCGTGTTC TCCGTCGAAT AG
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Protein sequence | MSEITTSSVL NAIAVAAKTL ESRKDEVNRL NVFPVPDGDT GTNMSLTLQM VVKNVAKLPI GSTGAEIRKA ITTGALMGAR GNSGVITSQI LRGLCEGLEG VEELDVNAID SALDSARTVA FQAVRKPVEG TILTVIKDAA ASARKAKRKK MSVEDALETV VKDAYASVQN TPELLPVLKE NGVVDAGGYG LAILLDAFVA SLLGKEGFTE DAISFARPAP KVAIEQIDDW DPDSAFRYCT EFLVHSDTVD VDEAKAFLPT MGDCDLMVGM HPNFKVHVHS NRPDQVLGWF LDHDSQISEV HVHNMGLQSE ERTEKIEAER AAEHKTVGIV AVAPGSGNAK ILESLGVDVV VSGGQTMNPS TADLLEAANK VNADQVIIMP NNSNIVMAAQ AACQVSEKPC IVVPTKTVPQ SFSAMFGFNP EATLEENAEA MAEAFADTKT GEVTHAIKDS KDAHGNPIKN GDVIGIADGS IECVGSSLED VVLDLLEVME ADDADTATIL AGADYSDEEL EALVARIEET YEDLEVESHR GEQPLYPIVF SVE
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