Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_09270 |
Symbol | |
ID | 8394818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1068345 |
End bp | 1069511 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644985686 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_003143317 |
Protein GI | 257063645 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGATG GTCTAAGCAG AGATGAGCAA AGGCTGCTCA ATCACGTTCG GGAGTACGGA GAGAAGTACT TCACCCCGGC GTCCATTTCG AAATGGCGCA AAGATCAGGG ATTGCCGGAC GAGGTGGTCA AAGCTTTTGT GGATTTGGAC TTCAACGGGT TCGGGGTCAT CCATCGAAGG AACCACAGGA CCTACGACCT GTTCGCACAA GTGCTGGTCA TCGAGGAGCT GAGCCGTATT TCCGGAGCCT GCCTGCCGTT CCAGAACGAT CTTCTGCAGC TGCAGATCCT GGAGGCGTTC GCCAGCTCGG CACAGACATC GCCGTTCCGC ACCGAATACC AGGACACAGG ACGTCTGTCC TATGCTCTGG CCATCTCTGA GCCTGAGGCC GGCTCTGACA CCCGCAGCAT GCGCACGCAC GTGACGCGTG AAGGCGATAC GCTGGTCATG AACGGAACGA AGATGTTCGT GAACAACGGG GAATACGCTC CTGCGCTGCT CGTGTCGGCT TATGACAAGA CCGGAGACGA CGGCGAGCCG GAATTCTCGT TTTGGATGGT CCCTCGTTCC GCCGCGGGCA TCTATGCATA CCCGGAACAG AAAATCGGCC AATCCATGCT TCCGTTCGCC ACCGTCAGGT TCGACAACGT CGAGGTTAAG GAATCATGGC GGCTTAAGGG CTCTTCCAAG GGCTTCTCCC AGCTGTACAG CCTTCTGGAG TACGGACGCG TGTTCACGTG CGCAGCGGCC CTCGGAGAGG CTCAGGCGGC CATGGAGGAC GCCGTTGCGT GGGCCCGCGG ACGCGAGGCC TTCGGACAGC GCATAGCGGA TCTTCAGCAG GTCCAGATGA AGCTGACTGA GATGGAGGTC AAGCTGACCA ACATGCGCAA TCTGGTTTAC GGGGCCGCGC GGGAATACGA CAGGGGAGAG CATAAGCGCC TGAGCGTCGC CCTGATGAAA TACTACGTGC CCAAGGCGGC GACCGAGGTG GCAAGCGATG CCATGCAGAT TCTGGGCGGC CGCGGATACA TTCAGGAGAA CAGGGTTTCT TCCATCTGGC AGGACTGCCG CGGCTACCAG TTTGCCGACG GTACCGACGA GGTCATGGTC GTCATCGCTG CACCGCTCAT TCTGGAGCAA TACAAGGCCT CGAAAAACAA TCGATAA
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Protein sequence | MYDGLSRDEQ RLLNHVREYG EKYFTPASIS KWRKDQGLPD EVVKAFVDLD FNGFGVIHRR NHRTYDLFAQ VLVIEELSRI SGACLPFQND LLQLQILEAF ASSAQTSPFR TEYQDTGRLS YALAISEPEA GSDTRSMRTH VTREGDTLVM NGTKMFVNNG EYAPALLVSA YDKTGDDGEP EFSFWMVPRS AAGIYAYPEQ KIGQSMLPFA TVRFDNVEVK ESWRLKGSSK GFSQLYSLLE YGRVFTCAAA LGEAQAAMED AVAWARGREA FGQRIADLQQ VQMKLTEMEV KLTNMRNLVY GAAREYDRGE HKRLSVALMK YYVPKAATEV ASDAMQILGG RGYIQENRVS SIWQDCRGYQ FADGTDEVMV VIAAPLILEQ YKASKNNR
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