| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_08960 |
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| Symbol | |
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| ID | 8394787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1036513 |
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| End bp | 1037199 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644985655 |
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| Product | thiamine pyrophosphokinase |
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| Protein accession | YP_003143291 |
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| Protein GI | 257063619 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1564] Thiamine pyrophosphokinase |
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| TIGRFAM ID | [TIGR01378] thiamine pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000037051 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGACGC TGCCGGCGGA CCGAAACCAC AAGGAGGCTA CGAATATGGA CATCGCGAAG
ACCTGCGCCA TCGTGGGTGC CTCGGATTTC AACGCGGAGC ACTTCTTGGC GCACCCGTTC
GGTTTCGTCA TTGCAGCCGA CGGCGGATTG GCCCATTTGG AAGCATGCGG CGCGCATCCC
GATATGGCAT TGGGCGATTT CGATTCGTTG GGCTATGTGC CCGAGCGTCC GGTCGTCGAG
CGTCATCCCG TCATGAAGGA CGAATCGGAC CTGGAGCTTG CCATCGACAG GGCGCTTGAG
TTCGGATGCG CGGACATCGT GCTGTATGGG GCTCTGGGCG GCCGTGCAGA TCACACCTAT
GCTACGCAGC AGACGATGGT GCACGCCGTC CGCCATGGGG CAAGGGTTTA TGCCGTCGGT
GCCGACCATA TGGAAACCGT GCTGCATGGC CCCGCAGCTT TGGATTTGCC GGCATGTTCT
GCGGAAACGT TTTCCGTGTT CGCCGTAAGC GACAGGGTGG AGGGACTTTG CGAGTCGGGC
TCGCTGTACG AAACGGACGG CCTCGTTTTG ACGAACGACC TGTCGAGGGG GCTGTCGAAC
GAGTTCACCG GTTCCCCTGT ACGCATAACC CTTGAGTCGG GCGACCTGAT CGTATTTCTG
CCAGTTCTTC CGTTGGTCGA TCTGTAG
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| Protein sequence | MQTLPADRNH KEATNMDIAK TCAIVGASDF NAEHFLAHPF GFVIAADGGL AHLEACGAHP
DMALGDFDSL GYVPERPVVE RHPVMKDESD LELAIDRALE FGCADIVLYG ALGGRADHTY
ATQQTMVHAV RHGARVYAVG ADHMETVLHG PAALDLPACS AETFSVFAVS DRVEGLCESG
SLYETDGLVL TNDLSRGLSN EFTGSPVRIT LESGDLIVFL PVLPLVDL
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