Gene Shel_08800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_08800 
Symbol 
ID8394771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1019304 
End bp1020977 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content60% 
IMG OID644985640 
Productcell division protein FtsI/penicillin-binding protein 2 
Protein accessionYP_003143276 
Protein GI257063604 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000196168 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCCGACCA TTCCTGGTTC CCGCACGCTA TCGGGCAGAG TCCTCATCAT ATTCGTCGCT 
TTCCTTATCG CCGCGCTTGC GCTCGTCGGT AGGTTGGCGT ATCTGCAGCT CATCAAAGCA
CCCGAATACG CTTCGATGGC CGAATCCAGC CGAACCGTCA ACGTGACCAT ACCTGCGAAG
CGCGGCACAA TCTACGACCG CAACGGCAAC GTGCTGGCCA CCAGCGTCGA TGCGACGACC
ATCTACTGCG ATCCCACCAT GGTGGACGAT CCGCGCGAGA TGGCCGACGC CCTGGCCGAA
TGCCTGGGCG GCAAATCCGA CGACTACCTG GCCCTCATCA CGCAGGACAC CACGTTCGTG
TACGTGAAGC GCAAGGCCGA CGTGAACAAG GCCGAGAGTC TTAAGGAAAA GGGCCTTTCC
GGCCTGTATT TCCTGCCGGA TTCCCGTCGC GTGTACCCGT ACGGCAGTTC CGCCGGCCAA
ATCGTCGGCG CGTCGAACAT CGACGACGTG GGCATCACGG GACTCGAGCT GTACTACGAC
GACATCCTGT CGGGCGTGCC GGGCAAGATG GTGTATGAGC AGTCGGCCAC GGGCATTCCC
ATTCCCAATG CGACCGTCGT GGAGCGCGAC GCCGCCGACG GCCAGGACAT CATCATCTCC
ATCGATATCG ACATGCAGAT CTATATGGAG GAGCGCCTGT CCCAGGGCGT CGCCGACATG
GGCGGCTCTG ACGGCACGGC TGTGCTGATG GATGCTGCAA CCGGCGAAAT CTACGCCATC
GCCTCCACTC CGTACTTCAA TCCGGGAGAC CTGAGCGAAG TGGAGGACGG CGCCACGTCC
ATCAAAGCCA TCACGTCCGG TTTGGAACCC GGCTCCATTT TCAAGACCGT GTCGGCAACG
GCCATTCTCG AGAACGGGAA GATGACTCCC GACACCGAGG TGTTCTGCCC GGCGTATCTG
GCCGTCGATG AGTATTACAT CGAGGACATG CACGAACGCG GCGACATGAC CATGACGTTC
CGCGATATCA TCCGCGATTC GTCCAACGTC GGCATTTCGC TGTCCGTCGA CGAGTATCTG
GGTTACGACA AGCTGTATGA CAAGATTCTG GAGTATGGCT TGCATAGCGC GACGGGCGTC
GATTACCCCG GCGAGGAAGT CGGCTTCCTG AGCGATTATT CGGAATGGTC CATGACCCAG
GCGTACAACA TCTCCTTCGG TCAGGGCATC ACCTGCACGC CGCTGCAGAT GACGCGGTTC
TACGGCGCCT TGCGTAACGA CGGCGTGGCT GTGACGCCGC ACTTCCTGGT GTCCCTGCCT
CAGTCGGGCG AAACGCCGGA ATACGAGACC GAACAGATCA TTCAGAACAC CGAGGCCGTG
CCGACCATGG TCGACATGCT TCAGACGGTC GTTGAGGAAG GCACGGGCGT GGACGCCCAG
ATGGAAGGCT TTACGGTTGT TGGCAAGACG GGTACGGCCG AATTCGCTCT CGAGACCGGC
GGGTATTCCA CCACCATGTC GAACCGCGAC TTCGTCGGGT TCCTTCCGAA CTCGACCTCC
TCGTTGGTTT GTTATGTGGG CGTCGACCAT GTGCCTGTGA CGGGCGCGGT CACGCCGATC
TTTAGGGATA TAATGACGTT CGCCGTTGAC CAATACCGAA TAGCAGAACA GTAA
 
Protein sequence
MPTIPGSRTL SGRVLIIFVA FLIAALALVG RLAYLQLIKA PEYASMAESS RTVNVTIPAK 
RGTIYDRNGN VLATSVDATT IYCDPTMVDD PREMADALAE CLGGKSDDYL ALITQDTTFV
YVKRKADVNK AESLKEKGLS GLYFLPDSRR VYPYGSSAGQ IVGASNIDDV GITGLELYYD
DILSGVPGKM VYEQSATGIP IPNATVVERD AADGQDIIIS IDIDMQIYME ERLSQGVADM
GGSDGTAVLM DAATGEIYAI ASTPYFNPGD LSEVEDGATS IKAITSGLEP GSIFKTVSAT
AILENGKMTP DTEVFCPAYL AVDEYYIEDM HERGDMTMTF RDIIRDSSNV GISLSVDEYL
GYDKLYDKIL EYGLHSATGV DYPGEEVGFL SDYSEWSMTQ AYNISFGQGI TCTPLQMTRF
YGALRNDGVA VTPHFLVSLP QSGETPEYET EQIIQNTEAV PTMVDMLQTV VEEGTGVDAQ
MEGFTVVGKT GTAEFALETG GYSTTMSNRD FVGFLPNSTS SLVCYVGVDH VPVTGAVTPI
FRDIMTFAVD QYRIAEQ