Gene Shel_08690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_08690 
Symbol 
ID8394760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1008866 
End bp1009402 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content58% 
IMG OID644985629 
Producttranscription antitermination protein nusG 
Protein accessionYP_003143265 
Protein GI257063593 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000619667 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.9364e-08 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTAAGA AGTGGTACGT CCTGCATACC TATTCCGGGT ACGAAAACAA GGTGAAGCAG 
ACCCTCGAAA GCCGTGTCGA GATGATGGGC CTCGAGGATA GCATCGTCGA TATACAGATC
CCGACCGAGA TGGTTACCGA AATCAAAGAA GGCGGCCGTC GCGTCGAGAG CGAAAAGAAG
GTATTCCCGG GCTACGTGCT GGTCCGCATG GAGATGAACA ACCAGAACTG GTCGGTCGTT
CGCAACACTC CCGGCGTCAC CGGTTTCGTT GGCGGACAAG GCGAACCTGA ACCGCTGACC
CGCGAGGAAT ACAACAAGAT CATGAAGCGC ACCTCCGTTA AGGCGGGCGC TCCGAAGAAG
ACCTCCACTT CGCTTGAAGT GGGGCAGTCC GTGAAGGTCA CCAGCGGCCC CTTGGCCGAT
TTCGACGGCA CCGTTTCCGA AGTGTCGCCC GAAGCCGGCA AGGTGAAGGT CCTGGTTTCG
ATCTTCGGCC GCGAGACCCC CGTCGAGCTT TCGTTCGACC AGGTAGCTCG CATTTAA
 
Protein sequence
MAKKWYVLHT YSGYENKVKQ TLESRVEMMG LEDSIVDIQI PTEMVTEIKE GGRRVESEKK 
VFPGYVLVRM EMNNQNWSVV RNTPGVTGFV GGQGEPEPLT REEYNKIMKR TSVKAGAPKK
TSTSLEVGQS VKVTSGPLAD FDGTVSEVSP EAGKVKVLVS IFGRETPVEL SFDQVARI