| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_08490 |
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| Symbol | |
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| ID | 8394740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 986729 |
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| End bp | 990484 |
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| Gene Length | 3756 bp |
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| Protein Length | 1251 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644985609 |
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| Product | ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing |
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| Protein accession | YP_003143249 |
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| Protein GI | 257063577 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.266931 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAG AAACGCTCAC ACCTCCTCAG AGGGCAAGCG TCGAAACTTT GGACCGGCCG
CTTGTCATTT CTGCAGGTGC CGGCAGCGGC AAAACGTTCA CGTTGACGCA GCGAATCGCC
TGGGCTTTGC TTCCCGGCTC GGGCGAGGGG GGCGATCCTT TCGTCGACAG CATCGATGAG
GTCATGGCCA TTACGTTCAC CACCAAGGCG GCCCAGGAGA TCAAGGCGCG TGTGAAGAGT
ACCCTACGGG CGGAAGGCAT GGTGGAGGAG TCGCTGAAGG TCGATTCCGC GTGGATCTCC
ACCATCCACG GGATGTGTTC GCGCATCCTG CGGGAACATG CGTTGGAAAT CGGCATCGAC
CCGGCGTTCA CGGTGTTGAA CGAAGCGGAC GCGACCGACA TGATGGAGCG TGCCATCCAG
ACCGTGCTCT CCCAGGCCGA TGAGCTGATG TCTCCCGAAG GCATGGACGG GCTGTTCGCC
GAGTACTCCA TCAGACCCAA CGCTTTCGGC GGCGAATCCA TCGAGCGCAT GATTCGCTCT
TTGGCAAATG CGGCGGCCTC GTCGCCTGCG GGATTCGATG CCCTGCGCGT GCCGCCAGAA
GGGCGCGGTT GGACAGACCT GCTTCGTGCA GCGTGGCAGA CCTGGGAAGA CATGGGCGGG
GTGGTGCGCA ACCTGAAGGC CAGCGCCACC AGGGATGCCC TGCTTGCCAA GGGGGATGAC
GCCGCCGAGG CGGTGCAGGC CTTGCTTATG TCAGGGGAGG AGCCTACTCC TGAGGCGTGC
CTGGAGATTC TTTCCCAGTT CCCCGATCCG AACGGCCGTA TCGGACGCAG CGACGAGGCG
TATTGCGAAG GCAAACCGAG GTGGAAGCAG ATGTGGTCGC TTTTGGCGGG AGAGGCTTTG
TGCAAGCTGT CTCGCCCGTT CGTCAACGAT CTGATCACCT TGTCCAAACG GGTGCTTAAG
GAATACGAGG CCCTGAAATC GGCGGCGTAC GCACTGGACA ACACCGACCT TCTGGTACTG
GCGTTCAGGG CGTTCGACCA GCATCCCGAA ATAGCCGACC AATACGCGCG AACATTCAAG
CTGGTCATGA TCGACGAGTT CCAAGACACC GACCAGCTGC AGATAGACAT GATCTCCCAC
ATGGCGGGCG AAGGTTTGGA GCGGCTGTGC ACGGTGGGCG ACGCCCAGCA GAGCATCTAC
CGTTTCCGCG GGGCGGACGT GGACGTGTAC CGCCGGCATG TGGAGCGGAT GCAGAAGCGC
GACGATGCGG TGTATGTGGA GCTGCACGAT AACTTCCGCA GCCATGCAGA CGTGCTGTCG
TTCGTGGACT GCCTGTTCGG CCGAAGCTGG ATGTTCGGCG ATGCCTTCAT GTCGTTGGCG
CCTGGCCGAA ACGAAGCCAA GGTGAAGCGG CCGTACCGCA GCGACACACC TCGCATCCAG
CTGCAACTGG TGGAACGGGA GCAGCGCGAC ACCGCCGCCG AGAGGGCGAC TGGAGCCGAC
GCCTGCCGCA TCGAGGCGCT GGGCATCGCG AAGCGGTTCT CCGAGCTGCG CCGGGCCGGC
CATCCGTCGT CCGACATGGT GGTGCTGCTG GGGCGTATGA CCAATGCAGA CGTGTACGCC
CAGGTCCTGC GCGATGCGGG TTTCGAGTGC GTCATAGCGG GCGGCTCCCT GTTCGGCAAG
ATGCCCGAAA CTCTTGTGGT GCTGCGCCTT CTGCAGGTCG CAGCCGACCC CAACGATGCA
CCGGCGCTTT TCGAAGTGCT GACCAGCGAT ATGTTCGCCC TGTCCGCCGA CGACCTATTA
GAGCTCGCCA CGGACCGCAC GGCGAAGGAA GGCCTTCGCA AGCGGGACAT CTCCAAGGGG
CTGTTCCGCC TGCATGCCGA TATGGAAGAG GGGATGCCGG CAAGCCCGGC GCTCAGGCAT
GCGGTGGAGG TGCTTCGGGA CATGTGCTTC CGGGCGGGCA GCGATGCGCC TGATCGGATT
TTGACTGAGG CGCTGGTGCG CTCCGGATGG CTTTCCCGCC TGCAGGAGCA AGGGGCCCAG
GGCATGGCCG TCGCCGGCAA CGTTCTCAAA GCCGTGCGCA TGGCAGGCGA CATCTGCCAA
GAGAACGTGT GCGGCGTTGC CGCTGCGGCC CGGGAGATGG CGGCCCGGCT CGAAAGCTGC
AAAGAGGCGC CGGGTGCCCT GTCGGCGGAG GCGGGCGACT TCGTGCGCAT CATGACCATC
CACGCCAGCA AGGGCCTTGA GTTCCCGATC GTCGCTGTGG CCGATTTCGC GAAGGAACGC
CGCTCGTCCG CAGGAAAATT CATGTGCGAA ACCATCCGCG GCACAACCTA TATATCCCTC
ATGCCTGGCA ACTCCGCCTC CGATCTCGAG GTGCTTACCA AGCGTGCGAA GGCCTATGCA
TCCGTCGACC CCGAAAAAGA TGACGTTGAC CTGATAGGGG CCATCGAAAG TGCGGCGTCC
CAAACGGAGC TGCGCAGCCT GTTGACCGCT TACGGGATTC AGCAGGAAAA GGAGGAATCC
CAGCGTCTGC TGTACGTGGC GTTGACCCGC GCCAGCGAGT CGCTGTTCGT ATCGATGCAC
GTGAAACGGA CCAAGCAGCC GGCGGTCTAC ATCGACACGA TGTCCGACAT CCGTGCAGGC
CTGATGGCCG CGCAAGGTAA TGCCGAAGGC GATTTTCCTG ATCAGGCCGG CGTGCCGGTG
CCGCTTGAGT ACGGCGGTTC CGCTCCGGCG CTGTTCACCC GGCTTCCCAT CTCACGTGAC
GTATCGGGCG GCCTGTCCTA TCCCGATGCG CTGCAGGGGT TTGCGGCTAC GCTTGTGCCC
ACACAGGCGA GTTCCACCGT GACGTTGCCT GATCCCGGGC GGGGCATCGT GGCCGTGGAC
GGTGCGCCCA GCGTGTTCGA CCGGGGCAAC GTGCGTAGCT ACTCGTCGTT GGAGGAAGCG
CTGCCGGCGG GCTTTCTAGA GGGCGAGACC GATGCGTTGG GGACTGCATC CCCGTCGCCT
TTCGGTGCGG TTTCGCTGTC CTACGAAACC GAAGACTCCC GAGCCGCCTA CGGATCGTCT
CAGGATGTGC TGGACGACCC CTTCGCCGAT GACGACGCGT TCTGGGATGA GCTTGCGGCC
GACTTGTCGT CCGACACGGA CAAGGCGACG GATGTGGGAT CGGCGTTCCA CGCGCTGGCC
CAATGGTCGG TCGAAATGGC GAACGGGCAG GTGGAAGGCG AGGGCCATGC GGTTCCTCTT
CCTGTTCCCG ACGCGCAGCG CATCGCTGCG GTCATGAAGG TCAACGGAGT GGATGCGGCT
AGCCATGTCC GCCTTGAGGA AGCGTTGCTC CGCTGGTACG GAAGTGACGC ATGCGCCCGA
GCGCTGGCCT GTAAGAACCT TCAGGCCGAA GCCCCGTTCT TCGTGACGGT CCCGGATGAT
GGCGGCACGG AGCTGTATCT GGAGGGCTCC ATCGACCTGC TGGCTTCCGA TGGAGGCTTC
GATCAGGCTT ACATCGTCGA CTACAAGACC GGCGGGCACG AGGACGAAAC GTCTGAGAAG
CTGCAGACCA AGCACCTTCT GCAGGCAACA TGCTATGCGT ATGCGCTGTT CACGCAGGGA
TATGGTCGGG TCGACCTTTC TTTCGTCCGC GTCGAGCAGG AAGACGCCGA TGCCCCAGGC
CAGCCCCAGT GCGTGAACTA CTCCTTCACG CTCGAGGACG CCCCCGTCTT GGCGAAGCGC
ATCCTGTCGG CCTACAAGGC AGGCGGGCGG TCATGA
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| Protein sequence | MNKETLTPPQ RASVETLDRP LVISAGAGSG KTFTLTQRIA WALLPGSGEG GDPFVDSIDE
VMAITFTTKA AQEIKARVKS TLRAEGMVEE SLKVDSAWIS TIHGMCSRIL REHALEIGID
PAFTVLNEAD ATDMMERAIQ TVLSQADELM SPEGMDGLFA EYSIRPNAFG GESIERMIRS
LANAAASSPA GFDALRVPPE GRGWTDLLRA AWQTWEDMGG VVRNLKASAT RDALLAKGDD
AAEAVQALLM SGEEPTPEAC LEILSQFPDP NGRIGRSDEA YCEGKPRWKQ MWSLLAGEAL
CKLSRPFVND LITLSKRVLK EYEALKSAAY ALDNTDLLVL AFRAFDQHPE IADQYARTFK
LVMIDEFQDT DQLQIDMISH MAGEGLERLC TVGDAQQSIY RFRGADVDVY RRHVERMQKR
DDAVYVELHD NFRSHADVLS FVDCLFGRSW MFGDAFMSLA PGRNEAKVKR PYRSDTPRIQ
LQLVEREQRD TAAERATGAD ACRIEALGIA KRFSELRRAG HPSSDMVVLL GRMTNADVYA
QVLRDAGFEC VIAGGSLFGK MPETLVVLRL LQVAADPNDA PALFEVLTSD MFALSADDLL
ELATDRTAKE GLRKRDISKG LFRLHADMEE GMPASPALRH AVEVLRDMCF RAGSDAPDRI
LTEALVRSGW LSRLQEQGAQ GMAVAGNVLK AVRMAGDICQ ENVCGVAAAA REMAARLESC
KEAPGALSAE AGDFVRIMTI HASKGLEFPI VAVADFAKER RSSAGKFMCE TIRGTTYISL
MPGNSASDLE VLTKRAKAYA SVDPEKDDVD LIGAIESAAS QTELRSLLTA YGIQQEKEES
QRLLYVALTR ASESLFVSMH VKRTKQPAVY IDTMSDIRAG LMAAQGNAEG DFPDQAGVPV
PLEYGGSAPA LFTRLPISRD VSGGLSYPDA LQGFAATLVP TQASSTVTLP DPGRGIVAVD
GAPSVFDRGN VRSYSSLEEA LPAGFLEGET DALGTASPSP FGAVSLSYET EDSRAAYGSS
QDVLDDPFAD DDAFWDELAA DLSSDTDKAT DVGSAFHALA QWSVEMANGQ VEGEGHAVPL
PVPDAQRIAA VMKVNGVDAA SHVRLEEALL RWYGSDACAR ALACKNLQAE APFFVTVPDD
GGTELYLEGS IDLLASDGGF DQAYIVDYKT GGHEDETSEK LQTKHLLQAT CYAYALFTQG
YGRVDLSFVR VEQEDADAPG QPQCVNYSFT LEDAPVLAKR ILSAYKAGGR S
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