Gene Shel_08460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_08460 
Symbol 
ID8394737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp983318 
End bp983803 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content56% 
IMG OID644985606 
ProductybaK/ebsC protein 
Protein accessionYP_003143247 
Protein GI257063575 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00011] ybaK/ebsC protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.466447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.283555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCCG ACAAGTCGAA AGACAAGACC AATGCGATGC GCATGCTGGA TGCTGCGAAG 
GTCGAATACC GGGTGGAACA CTACGACCCC GACCTGCCTT TGTCTGGAAC GGAAATCGCG
AATCTGTTAG GCCAGGATAC CGACCAAGTG TTTAAAACCC TGGTCACGGT GGGCAAGAGC
GGAGATCATT ACGTGTTCAT GGTGCCCGTC GAGGCGGAGC TCGACCTGAA GAAGGCCGCC
CAGGTAGCGG GTGAGAAGAG CATCGCCATG ATTAAATCGA AGGAGCTGCT TCCTCTGACC
GGCTACGTCC ACGGCGGCTG CAGCCCCCTG GGCATGAAGA AGCTCTTCCC CACGTTCATC
GACGAGACAG TTACACTGTT CGACGTGTTC ATGTGCTCTG CGGGCAGGCG AGGTTGCCAG
ATTCAACTCA CGTTGGAGGA CCTTTTGAAG GTGATTCCTG TTGAGGTTGT GGATGTAACT
GCATAA
 
Protein sequence
MAADKSKDKT NAMRMLDAAK VEYRVEHYDP DLPLSGTEIA NLLGQDTDQV FKTLVTVGKS 
GDHYVFMVPV EAELDLKKAA QVAGEKSIAM IKSKELLPLT GYVHGGCSPL GMKKLFPTFI
DETVTLFDVF MCSAGRRGCQ IQLTLEDLLK VIPVEVVDVT A