| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_08360 |
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| Symbol | |
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| ID | 8394727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 966773 |
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| End bp | 969250 |
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| Gene Length | 2478 bp |
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| Protein Length | 825 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644985595 |
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| Product | collagenase-like protease |
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| Protein accession | YP_003143239 |
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| Protein GI | 257063567 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.593453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAATC CGTACCGCTC GCTCGAGCTT TTGGCCCCTG CAGGCGATAT GACGTGCTTG
CACGCTGCCG TGTTGGCAGG CGCGCAAGCG GTATATCTTG GTCTGGGGGA GTTCAACGCA
CGACGCGGAG CAGACAATTT CACATTGGAG AATCTGGGGG AAGCGTGTGA TTTCGCGCAT
CTCCATGGCA CGCGCGTCTT TTTGACGGTG AATGTCGTCA TCCTTCCTGA TGAGACGGAA
CGTGCGTTGG ACCTGGTCCG TCAGGCCTGG CTGCGCGGTA TCGACGCGGT CATCGTGCAG
GATCTGGGCC TGGCGTCGGA AATCGGCCGC ACCATGCCGG AGGTGGAGAT GCATCTCTCG
ACGCAGGCCA ACACACATGA CGAAGACGGC GTGCGGGCGG CGTGGGCTCT GGGCATGAGC
CGCGTCACCT TCGCCCGCGA ACTGACGCTT TCGGAGATCT CTGACCTGTC CGATATTGCC
CATGAGTTGG GCATGACCAC CGAATCCTTC GGGCACGGCG CACTGTGCGT GTGCTATTCC
GGGCAGTGTT TCATGAGCTC CATGATCGGC GGGCGCTCTG CAAATCGGGG CATGTGCGCC
CAGGCGTGCC GTCTGCCGTA TACGCTCGAA AACGAGGCGG GCGAAGAACT TCCTTCCGAC
GGCGAGCATC TGCTGTCGCC GAAGGACCTG GCCACCATCG ATATGCTGCC GGAAATCGCC
GTTACCGGTG TGGACAGCCT CAAGATCGAA GGCCGCATGA AGTCGCCCGA ATACGTCTGG
ACCGTCGTGG GCCTGTATCG ACGGGTTCTG GACAGGCTGG CGCAGGACTT CGACGAGCGG
TTTCCTGGCG GGGAGTGCTC AATCGAAGAT GTGCTTGCCG CCGGGCACGG CGAAGGCGTC
GTCCCGACCG CCGATGAGCT GCGCATGCTG GCGGAGGCGT TCACTCGCGG GTTCACCCAT
GCATATATGG AACGCGCGCG CGACAACGGC ATTATGAGTT ACACCAGGCC CAACAACCGC
GGCGTGTTCG TCGGCCGCGT GGCCGATGTG CGTGATGGCG AAGTCGTGGT TGCGTCTGAT
ATCGAGCTGC ACGCAGGCGA CCTAGTTGAA TTTTGGACGA ACAAGGGCCG ATTCGCCGTT
TCCGTGTCCG AGCAGAGTTT CCTGGGCGGT GGCGAATACC TGCTTCCGGT GGAAGATCGC
GTCCACAAGG GGGATCGCGT GTTCCGTGTT CGCAGCGCCG AGCTGGCGTT CGTGGACGAT
TCTGATGCCG GGCTGGTGCC TGTCGAAGGC ACGGTCCGCC TCCGCATAGG CGAGCCTCTT
ACTATCGAAT TTGCTTGCCA GGGTGTCGAC GTCCGGTTCG AAGGCGCCGT TGTCGAGGCG
GCCCGGACCA AGGCCGTTTC TGCCGAAGAG GTGTACGACC ATATCGACCG GTTCGGAAAC
ACGTCGTTCT ACTTGGACGC CCTCCACATC GACCTGGATG ACGGCGTAGG CATCGGCTTC
TCGGCTCTGC ACAAGGCCCG CACGAAAGCC CTTAACCAGT TGAAAGATGC CCTGCTGGCG
TCCTATCGCA TGCGCTCGCT GCCCAAGCCC GAACCTCGCG ACAAGAAACG CCGTCCCGCT
GTTTCGGACA TCACCGTTGC AGCCATCGCG ACCAATCCTG CGTGCGCACG GGCCGCTAAG
CGAGCGGGTG CGGATGCGGT TTACGTGCCC GTCCTGAACG TGAAGCGGGG CACGGCCACG
CTCAAGGGCG TGCTGACCGA TTCGCCTGAG CAGGCCGGAT ACCCCGGGCG TCGCACCACG
GTCATGCCCG TGGTGGACAA AGACCCGCTC AATCGCGACG AGGCCGTGGA CTACTGGTCG
TACGCCAAAG AGGATAAGCC GCTTTACGTG GAGAACCTCG GCCAGCTGCT GAAGGCCCCT
GAGGTCGGGG CGGTTCCCGA GGTGGGGCCG CATATCCCCA TCACGAATGC TTGGTCTTTG
GACGTCGCGT CGTTGCTGGG CGCCCGACGC GTGTGGCTCT CGCCTGAGCT GACCCTGCGC
CAGATAGCCG ATCTGAGCAC GAATTCCCCC GTGGAACTGG GCCTTACTGT CTACGGATAT
CAGGAGCTCA TGACCACCGA GCATTGCCTG CTCATGAGCC AGGGCCCCTG CAATCAGAAG
TGCGGCGAAT GCCCCCGCCG GCGTGAGGCT CGCTACTTCA AGGACCGCAA GGGGTACCGC
TTCCCGATTG TCACAGACGC TTGCGGGCGA AGCCACCTGT ACAATGCTGT AGCCTTGGAT
GCGGCGCACC TGCTTCCGGA GCTAATCGAG GCGGGGGTAA CCAGTTTCAT GGTCGATGCG
ACGCTTCTGG ATGCCGACGA GACGGCGGAG GCCGTCGCCC GCGTGTGCCG AGCGCGTTCT
CTGGCTCTCA ACGGCGGCCA GAAGGTCGAC AAGCTTCGTG GAAAAACGAC GGGGCACCTG
TTCCGAGCCG TTCAATAG
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| Protein sequence | MVNPYRSLEL LAPAGDMTCL HAAVLAGAQA VYLGLGEFNA RRGADNFTLE NLGEACDFAH
LHGTRVFLTV NVVILPDETE RALDLVRQAW LRGIDAVIVQ DLGLASEIGR TMPEVEMHLS
TQANTHDEDG VRAAWALGMS RVTFARELTL SEISDLSDIA HELGMTTESF GHGALCVCYS
GQCFMSSMIG GRSANRGMCA QACRLPYTLE NEAGEELPSD GEHLLSPKDL ATIDMLPEIA
VTGVDSLKIE GRMKSPEYVW TVVGLYRRVL DRLAQDFDER FPGGECSIED VLAAGHGEGV
VPTADELRML AEAFTRGFTH AYMERARDNG IMSYTRPNNR GVFVGRVADV RDGEVVVASD
IELHAGDLVE FWTNKGRFAV SVSEQSFLGG GEYLLPVEDR VHKGDRVFRV RSAELAFVDD
SDAGLVPVEG TVRLRIGEPL TIEFACQGVD VRFEGAVVEA ARTKAVSAEE VYDHIDRFGN
TSFYLDALHI DLDDGVGIGF SALHKARTKA LNQLKDALLA SYRMRSLPKP EPRDKKRRPA
VSDITVAAIA TNPACARAAK RAGADAVYVP VLNVKRGTAT LKGVLTDSPE QAGYPGRRTT
VMPVVDKDPL NRDEAVDYWS YAKEDKPLYV ENLGQLLKAP EVGAVPEVGP HIPITNAWSL
DVASLLGARR VWLSPELTLR QIADLSTNSP VELGLTVYGY QELMTTEHCL LMSQGPCNQK
CGECPRRREA RYFKDRKGYR FPIVTDACGR SHLYNAVALD AAHLLPELIE AGVTSFMVDA
TLLDADETAE AVARVCRARS LALNGGQKVD KLRGKTTGHL FRAVQ
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