| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_08350 |
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| Symbol | |
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| ID | 8394726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 964431 |
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| End bp | 966602 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644985594 |
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| Product | penicillin-binding protein, 1A family |
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| Protein accession | YP_003143238 |
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| Protein GI | 257063566 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.207948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAATCAA GAAGAAAGCA ACGCGAAGCA CATGTCCGTC CAGGACTCAT CACGCTGACG
TTCATCATCG TTTCGATCGC CGCAGTTTGC TACGGCGTTT ACCAGGCAGC CTGGTCCCTG
TATGACAACT GGACGGCCGA CCTGCCCGAC GTCAACGACG CAAGCGCTTT CGAGCTGGCC
CAGAAAACCA CGATTCTCGC GAACGACGGC ACCACGGTCC TCGCCGAGCT GTATCTGGAA
GACCGCATCC CCGTCACCAT CGACCAGGTG AGCCCCTATG TCATCGACGG TACGGTGGCG
ACAGAGGACG AACGCTTCTA CGAGCACCAG GGCATCGACC CCCAGGGCAT CATCCGCGCC
ATCTACGTGA ACATGACCGG TGGCCAAGAA GGCGCCTCCA CCATCACGCA GCAGTTCGTG
CGTAACACGC TGATTTCCGA CGAGATGAAC GACATTACGT TCAAGCGTAA GGTCCGCGAG
ATGGAACTGG CCATCCAGCT CGAGAAGATT TACGACAAAG ACACCATCTT GATGATGTAC
CTCAACACCA TCAACTACGG CGACGGCTGC TACGGTATCG AAGCCGCCGC CGAGCACTAC
TTCAACACCA CTGCCGCCGA CCTGACCATC GCCCAGGCGG CAACGCTCAT CGGCATCCCC
AACTCCCCCA CGCTGTACAA TCCGGTGCTC AACCCGGACA ACGCGCTTTC CCGCCGCAAC
CTGGTTCTTT CCCGTATGCT CTCCAACCAC GTGATCACGC AGGAGGAATA CGATGCGTCC
AAGGCCGAGG ATCTGAACCT TGACGTGCAG GTCCGCGACT CCGACGACGG CATCTACATG
TACCCCTGGT TCACCAGTTA CGTTCGCGAC ACCCTGGTCA GCGAGTACAG CAGCGATGTG
GTGTTCAAGG GCGGTTTGAC GGTCGTCACC AGTATCGATC CCGAAATGCA GGAGTACGCG
CAGGCCGCGG TCGACGAGGA ATACGATCTG GGCACCATGT ATGACGATGC GGAAATCGCC
ATGACCTGCA TCGATCCCCA CACCGGATTC ATCAAGGCCA TGATCGGCGG CCGCAGCTAC
GGTGCAGACC AGTTCAACAT CGCCACGTCC GCCGAGGGAC GCCAGGCGGG TTCGTCGTTC
AAGACGTTCA CGCTAACCGC CGCGGTCGAA CAGGGCATCA ACCCCAACAC CACGTACATG
GACTGCAGCA CGCCCTACGT CTACCAGGGA ACCACGTTCA ACAACTTCAT GAGGCATGAC
TACGGCGTCA AGAGTATCGC CGACATGATC GCCGTCTCGT CGAACACCGG CTTCATTCGT
CTGGTAACCG ACGAAGGTGG CGTCTCGCCG TCCTCCGTCA TCGAGATAGC AAACCGCATG
GGACTCAACG AGGATTCGCT GCAGCCCTAC CCCACCATCA CGCTGGGCGT TTTCGGTGTG
AACACCACGC AGATGGCTAG CGCCTACGGC ACATTGGCGG CTGGCGGCGT CCATCACGAG
CCCGTCGCCA TCGTGACGAT TACCGACGCC AACGGCAACG TGATCGAGGA TCTGAGCGAA
GGCTCCGAAG GCGAGCAGGT CATTTCCGAA TCCGTCGCAT ATGCGGTCAC CAGGGTGCTC
GAAGGCGTCA TCACCAAGTC GATCGGCACG GCCAACGCCG CCGCGCTGCC GAGCGGCCAG
GTGGCGGCAG GCAAGACCGG CACCTCCGAA GACGCTCGCG ACATCTGGTT CTGCGGCTAC
ACGCCTCAGC TTTCCACCGC TGTGTGGGTG GGCCAGCGCG ACAACGGCGA CCAGCATTCG
GCAACTTGGG CGCAGGACGT TTGGCGCAAC TTCATGTCTG CAGCCCTGGA TGGCTATGAC
ATCGAAGACT TCCCCTACGC CCCCGATCCG GAATACGACA GCACGTACCG TTCGTCGGCG
AGCTACACGG ATTACGATGA GGACTACGAC GAGGTAGTAG AAGAAACCAC CGAGACGGAC
AGCTCCACGT CCACCGATTC CAATACATCC GACGACTCGG GTACGTCAAC CGACTCCGGC
ATGTCCGACG ACTCGGGCAC AGCCGTGGTG CCTGAGCCCG AGCCCGAGCC TGAGCCCGAG
CCTGAGCCCG AGCCCGAGCC CGAACCAGAG CCAGAGCCCG AACCGGAGCC TGAACCCGAA
CCCGGCGAAT AG
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| Protein sequence | MKSRRKQREA HVRPGLITLT FIIVSIAAVC YGVYQAAWSL YDNWTADLPD VNDASAFELA
QKTTILANDG TTVLAELYLE DRIPVTIDQV SPYVIDGTVA TEDERFYEHQ GIDPQGIIRA
IYVNMTGGQE GASTITQQFV RNTLISDEMN DITFKRKVRE MELAIQLEKI YDKDTILMMY
LNTINYGDGC YGIEAAAEHY FNTTAADLTI AQAATLIGIP NSPTLYNPVL NPDNALSRRN
LVLSRMLSNH VITQEEYDAS KAEDLNLDVQ VRDSDDGIYM YPWFTSYVRD TLVSEYSSDV
VFKGGLTVVT SIDPEMQEYA QAAVDEEYDL GTMYDDAEIA MTCIDPHTGF IKAMIGGRSY
GADQFNIATS AEGRQAGSSF KTFTLTAAVE QGINPNTTYM DCSTPYVYQG TTFNNFMRHD
YGVKSIADMI AVSSNTGFIR LVTDEGGVSP SSVIEIANRM GLNEDSLQPY PTITLGVFGV
NTTQMASAYG TLAAGGVHHE PVAIVTITDA NGNVIEDLSE GSEGEQVISE SVAYAVTRVL
EGVITKSIGT ANAAALPSGQ VAAGKTGTSE DARDIWFCGY TPQLSTAVWV GQRDNGDQHS
ATWAQDVWRN FMSAALDGYD IEDFPYAPDP EYDSTYRSSA SYTDYDEDYD EVVEETTETD
SSTSTDSNTS DDSGTSTDSG MSDDSGTAVV PEPEPEPEPE PEPEPEPEPE PEPEPEPEPE
PGE
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