| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_08100 |
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| Symbol | |
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| ID | 8394701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 938887 |
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| End bp | 940344 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644985570 |
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| Product | formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit |
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| Protein accession | YP_003143215 |
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| Protein GI | 257063543 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3303] Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.158297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000773325 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTGAAAA CATCCGCTTG GAAAAAGGGG TTGGCGTGGG TTTGCGCTGG AGCGTTCGTC
GTTTCGCTCG CAGCTGCAAC GGCCTGCGCA CCTACCGCGA CTTCTGAACC TACAGAAGCC
GAAGAGGCTG GCGATGCTGC TCAAACCGTT ACCTACGAGA CGCCCGAACC TGATGAGTAC
GGAGTCGTCA CGGCAGAGCA GTGGAAGGAT ATCTATCCCA ACCAGTACGC CACCTATGTA
AAGAACAAGG AGAATCAGCC CGTCGACTAC GCTGAGGAAA ACGGTCCTAC CGAGGATACG
ACCACCATCG CTGACGAGGG CTACGATGCT GCCGAAGCCG AAGCGAACGC AGCCGAGAAG
GTCAGCTACC TCGACACCAA TCCGGAAATC AAGATCCTGG GTTTGGGCTA CGGCTATGCG
AAGTACTACA CCGAGCCTGC CGGCCATGTC TACTCTCTGT GGACCGTCAC CCATAACGGC
CGCATCAGCG AGAAGAGCGG CGCCGGCTGC TGGGCCTGCA AGACTCCTCA GTTCTCCAAC
TATGTTGACG AGAACGGCAA CGAAGTCTTC AAAGAGAAGT TCCTGAGCAT GGACGGTTGG
TTCACGGAGG GCATCTCCTG CGCCAGCTGC CATGCAAACG ATCCTACGGG CTTCGAGATC
GACCGCGCAC AGTGGAAAGA CGCCATGGGT GCCGATGTCG ATACCGTCCC GATGGAATCC
GTAGTCTGCG GCCAGTGCCA CTGCGACTAC TCCATGGCTC CTGAGACCGG CATCCCGACC
AGCCCTTACA CGGGTGGTCT GGAATCCATG AGCCCCGAAA ACGCCCTTAA GTTCTACGAT
GACAACAACT TCGTCGACTG GACCTACGAG TCCACGGGCG CCCAGATGCT CGCCATCCGT
CATGCGGAGT TCGAGTTCAA CTACGCCAAC GGCGGAAGCC CCATGATCAA CATGATCAAC
CAGGCTACGG GCGAGAACTA CACCTGCAAC GACTGCCATA TGGGCAAGGC GACGGCCGAG
GACGGCACCG AGTACACCAA TCACCAGTGG ACCGTTCCTA CCGAGAATGA AGAACTGATC
GCCGAGAACT GCAGCATGTG CCACAAGGAC CTGGCTGGCG AGATCAAAGC CATTCAGGAC
GAAATTATGG CAAGCGAACA TGAGGTCGGA CTGCGTGCCT GCCTGTTCAT CTTCAACTTC
GAAGATGCCA TCGAGGCCGG TACCCTCACT GACGACCAGA TCGCCGAACT GCAGTACATC
CAGCGCGCCG CCTGCTACTA CTGGAACCTT GAAGCTGCCG AGAACAGCGA AGGCGCCCAT
AACCCCGACT TCTCCAGGGA GCTTATCGCT TCCGCCAACG AGTGGCTGGA CAAGGGTGAC
GAGATCCTCG GCGTTTCCTC CGTGGTCGAC GATGTCGCTG CCGCCGAGCA GACCGTAATG
GAACACACTG CCGCATAA
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| Protein sequence | MLKTSAWKKG LAWVCAGAFV VSLAAATACA PTATSEPTEA EEAGDAAQTV TYETPEPDEY
GVVTAEQWKD IYPNQYATYV KNKENQPVDY AEENGPTEDT TTIADEGYDA AEAEANAAEK
VSYLDTNPEI KILGLGYGYA KYYTEPAGHV YSLWTVTHNG RISEKSGAGC WACKTPQFSN
YVDENGNEVF KEKFLSMDGW FTEGISCASC HANDPTGFEI DRAQWKDAMG ADVDTVPMES
VVCGQCHCDY SMAPETGIPT SPYTGGLESM SPENALKFYD DNNFVDWTYE STGAQMLAIR
HAEFEFNYAN GGSPMINMIN QATGENYTCN DCHMGKATAE DGTEYTNHQW TVPTENEELI
AENCSMCHKD LAGEIKAIQD EIMASEHEVG LRACLFIFNF EDAIEAGTLT DDQIAELQYI
QRAACYYWNL EAAENSEGAH NPDFSRELIA SANEWLDKGD EILGVSSVVD DVAAAEQTVM
EHTAA
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