| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_07970 |
|---|
| Symbol | |
|---|
| ID | 8394688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 923457 |
|---|
| End bp | 925337 |
|---|
| Gene Length | 1881 bp |
|---|
| Protein Length | 626 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644985557 |
|---|
| Product | acetyl-CoA carboxylase, biotin carboxyl carrier protein |
|---|
| Protein accession | YP_003143202 |
|---|
| Protein GI | 257063530 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
|---|
| TIGRFAM ID | [TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000057905 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGGTT TGCAGCTGAT GGACACCACC ATCCGCGACG GCCAGCAAAG CTTGTGGGCC
ACGCGTATGC AGTTAGGTGA CATTCTGCCC ATTCTGCCTA AGATGGACAA GGTGGGCTAC
TGGGCCATCG AGGCCTGGGG TGGTGCGACG TTCGACACTT GCCTGCGCTT CCTTGACGAG
AACCCTTGGG AGCGTCTGCG CGTTATCAAA TCCCACACTC CCAACACCGA CCTTGCTATG
CTTTCCCGCG GCCAGAACCT GGTCGGCTAC AAGCATTATT CCAAGGAAAT CGTCGATCGT
TTCATCGATT GCGCCCATCG CAACGGCGTG CAGGTGTTCC GTGTGTTCGA CGCGCTTAAC
GACATCCGCA ACGTCATCGA CAACGCCGAA GCCATCAAGG CATGCGGCGG TTGGTTCGAA
GGCGCCATTT CCTACACCAT CTCGCCCGTC CACACGTTGG ACAGCTACAT CGAGTACGCC
CAGGCCCTCA AGGACCTCGG AGCTGACTCC ATCGCCATCA AGGACATGGC GGGCATGCTC
ACGCCGTATC GCACCGAGCG CATGGTGAAG GTCCTGAACG CCGAGGTGGG CTTGCCGGTT
CACGTGCACT GCCACTACGT CGGCGGCATG GCCCCCGCAA ACATCCTGAA GGCCGCCGAG
GCCGGCGCCG CCATCGCGGA CACGGCCAGC GCGCCTCTGG CTTTCGGCAA CAGCCACCCT
GCCGTCGAGA TGATCGTCGC CGCGCTCCAG GAAAGCAAGT TCGACACCGG CTACGACCTG
GACCTGCTGT TCGAAATCGC CGATTACTGG GAGGAGGTCC GCAAACGCGG CCACTACGCC
CGCGGCGTGT CCTCACTGAA CCACATGAAG GTCTACTCCC ACCAGGTGCC CGGCGGCATG
ATGTCCAACC TGGTCGCCCA GCTGGAAATC CAGAAGGCCA CCGACCGTCT GGACGAAGTG
CTGCACGAGA TTCCGAAGGT CCGCGCCGAA GTGGGCTATC CGCCGCTGGT CACTCCCATG
AGCCAGATCG TCGGTACCCA GGCCGTGCTC AACGTTTTGA CCGGCGCCCG TTGGAGCATC
GTCTCCAAGG AGATGAAGGA CTACCTGTGC GGCTATTACG GAAAGGCCCC GGGCCCCATC
GACCCCAAGA TCGTGGAGAA GGTCGTCGGC CCCAACGACG AAATTCTGCC GCCTGACGTC
TCCCCGGCGC AGCTCAACAC CGTCACCTAC GACGAGATCG CCGCGGAGAT CGGCGATTTG
GCCAATTCCG AAGAGGACGT GCTGATGTAC GCCCTGTTCC CGAACGAGGC CCGCAACTAC
CTGTCCAAGC ACCGCGCAAC CGAAAGGGTT GACTTCCTGC TGGAGAACGA GTCCAAACAG
ACCAAGGAGG ACGATTACGT GGATATCAGT CAGATTCGCG AGCTCGCGAA GGTCGTCGAA
GATTCCGGCG TAGGCGAGAT CACCGTTGAA GAAGAAGGCA TGCGCATCAG CATCCGCATG
CCCGGCATGG CTCCCGCAGG AGCTCCCGTG GTCGCCGCTC CGGCCGCAGC CCCCGCTGCC
GCTGCCGCTC CGGCTGCAGC TCCCGCAGCA GCCGAAAGCG ACCGTCCCAG CAACTGGGTT
GCCGTCAAGG CCCCCATGGT CGGCACGTTC TACGTGGCTC CCGCTCCTGG CGCGGACCCC
TTCGTCACGG AGGGTTCCGA GGTCGCTGCC GGCGAAACCA TGTGCATCGT CGAGGCCATG
AAGCTCATGA ACGAGATCGG AGCTCCCCAG ATGGGCATCG TCCGCGAGGT CTGCCTCGAG
GACGCCACGC CTGTGGAATT CGGCACCCCG ATGTTCTACA TCGAGCCCTA CCGCGATGCA
GATAAGGGCG AGGGGGAATA A
|
|---|
| Protein sequence | MPGLQLMDTT IRDGQQSLWA TRMQLGDILP ILPKMDKVGY WAIEAWGGAT FDTCLRFLDE
NPWERLRVIK SHTPNTDLAM LSRGQNLVGY KHYSKEIVDR FIDCAHRNGV QVFRVFDALN
DIRNVIDNAE AIKACGGWFE GAISYTISPV HTLDSYIEYA QALKDLGADS IAIKDMAGML
TPYRTERMVK VLNAEVGLPV HVHCHYVGGM APANILKAAE AGAAIADTAS APLAFGNSHP
AVEMIVAALQ ESKFDTGYDL DLLFEIADYW EEVRKRGHYA RGVSSLNHMK VYSHQVPGGM
MSNLVAQLEI QKATDRLDEV LHEIPKVRAE VGYPPLVTPM SQIVGTQAVL NVLTGARWSI
VSKEMKDYLC GYYGKAPGPI DPKIVEKVVG PNDEILPPDV SPAQLNTVTY DEIAAEIGDL
ANSEEDVLMY ALFPNEARNY LSKHRATERV DFLLENESKQ TKEDDYVDIS QIRELAKVVE
DSGVGEITVE EEGMRISIRM PGMAPAGAPV VAAPAAAPAA AAAPAAAPAA AESDRPSNWV
AVKAPMVGTF YVAPAPGADP FVTEGSEVAA GETMCIVEAM KLMNEIGAPQ MGIVREVCLE
DATPVEFGTP MFYIEPYRDA DKGEGE
|
|---|
| |