| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_07880 |
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| Symbol | |
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| ID | 8394679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 912190 |
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| End bp | 914145 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644985548 |
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| Product | glucan-binding domain-containing protein |
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| Protein accession | YP_003143193 |
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| Protein GI | 257063521 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00352799 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTTCTT GGCGCAGGTC GAAGGTGCTT TTCGCGATTG TCTGCCTTGC CGCGGCAATC
GCTGTTTCTG CAGCTATGCC CGCCGTGGCG CACGCGGACG GCGACCGTAT CCACATCCTC
ATGTTCAAAT ACTCCGCCGA CTGCATCGTT CTCGAAAGCG ATGGACGCTT CGGCGTCGTC
GACTGTGCCG AAGACTCCTA TTATCCCGAC GGAAGCGACG AGCGTTATCC CTGGCGAGAC
TACATCTCCA CCGAGGAACG CAGCAACACG GACCAGGTCA TCGGCTATCT CGATTCCATC
GGCGCGAACA CCGAAAACGT CGAGTTCCTG GTGGGGACGC ATCCCCATAG CGACCATATA
GCGAACGCGC CGCAGGTCAT AGAACGTTAT CTGCCCGATC GCGTGTACAC GCCTGAATAC
AGCGACGACT ACATCACCGA ACCGAGTCAG CTGTGGGACA ACCTCTTTGT GTACGACCGG
CTGGTCGAGG CGGCCGAAGC GAACGGTTCG GCGCTCATCC GGCATTTTTA TCCGGACGCG
CCGGTGACGC CCGAAGAGGG GAGCGATGTC GGATGCTCCG AGTTCGACCT GGGGTCAATG
CATATCACGT TGCTCAACAC CGATGAGAGC TATAAGGAAA CAGGGGTGTA CGGCGCGAAC
GCGTTCTCGC TGGGCGTCCT TGTGGAAGCG AACGGCCAGC GGGCCTTTCT GGCAGGCGAC
ATCAACAACA TCCCCGAAAG CTCCGGCGGC AAGAGCACCG AAGACAACAT TGCTCCGCTC
ATCGGCGATG TGGACGTGCT CAAGCTGGGG CATCACGGCA ACAAGAATTC CAACACGGCG
AACTTCCTGT ACACGCTTTC GCCTGAGATC GCCGTGCAGA CGGGCAAATC CTACCAGCTC
GTTGCCGAGT CCAAAGACGT GCTGTTGGAG CTCGGTTCGG CGTATTACTG CACCGATTTG
GCTCTCGAGC AGGGCGTGAC GGAGATCATC GTCGAGCTCG ATGCGGGCGG CTCCTACGTT
TCCAACGTCG AATCCATGCC CATGATCAAG GTCCACGAGG AAGACGGGCT GGCTCATGCC
TACCTGTACG GCGAACCGTA CGCCTATACG GGATGGCTTT CTGATGCGAC CCGTTACTGG
TATTTCGACA ACTCGCCTGT CGCCGCCGCC GACACGTGGG TGAAAATCGA CGGGAAGTGG
TATCGCTACG ACGAGTCCAG CAACCCGATT ACCGGCTGGT TCGACGAGGA CGAGGCCCGG
TATTACCTCA ACGCGAAGGG CGTCATGGCC ACGGGATGGA AACAGATCGA CGGGAGCTGG
TATTACTTCG GGTCGAACGG CGTCATGCAG TCGGGCGGCT GGAAGAAAAT CGACGGGTCC
TGGTACTATC TCACGTCTTC GGGTGCCGCC ATGACCGGCT GGATGAAGCA GGGCAAGGTC
TGGTACTGGT TCGCGCCGAA TGCCGTCATG GCCACCGGTT GGAAGAACAT AGACGGCTCC
TGGTATCTGT TCGATTCCTC GGGCGGCATG AAAACCGGAT GGCAGAAGGT CGGCGGCGCC
TGGTACTACC TTGATTCGAA GGGCGCCATG ATCACCGGCT GGCTGAAAAT CGACGACGTG
CAGTACTACT TCAGGGATTC GGGCGCTGCG GCCGTCGGAT GGGTGCGCTT TGGTGACGAC
TGGTACCATT TCGGCTCGTC GGGCGCCATG CAGACCGGTT GGCTGAAATC CGGCGGCACG
TACTACTATC TGAAGTCCTC GGGCGTCATG GCCACCGGAT GGCAGAAGGT CGGCGGCGCC
TGGTACTGGT TCAAGGATTC GGGCACCATG CAGACCGGTT GGCTGAAGCT GAACGGTACC
TGGTATTACT TCAAGTCATC GGGCGCAATG GTCACGGGGT CCCAGGTCAT CGGCGGCAAG
CAGTACCGCT TCAGCTCGTC GGGCGCCATG CTGTAG
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| Protein sequence | MPSWRRSKVL FAIVCLAAAI AVSAAMPAVA HADGDRIHIL MFKYSADCIV LESDGRFGVV
DCAEDSYYPD GSDERYPWRD YISTEERSNT DQVIGYLDSI GANTENVEFL VGTHPHSDHI
ANAPQVIERY LPDRVYTPEY SDDYITEPSQ LWDNLFVYDR LVEAAEANGS ALIRHFYPDA
PVTPEEGSDV GCSEFDLGSM HITLLNTDES YKETGVYGAN AFSLGVLVEA NGQRAFLAGD
INNIPESSGG KSTEDNIAPL IGDVDVLKLG HHGNKNSNTA NFLYTLSPEI AVQTGKSYQL
VAESKDVLLE LGSAYYCTDL ALEQGVTEII VELDAGGSYV SNVESMPMIK VHEEDGLAHA
YLYGEPYAYT GWLSDATRYW YFDNSPVAAA DTWVKIDGKW YRYDESSNPI TGWFDEDEAR
YYLNAKGVMA TGWKQIDGSW YYFGSNGVMQ SGGWKKIDGS WYYLTSSGAA MTGWMKQGKV
WYWFAPNAVM ATGWKNIDGS WYLFDSSGGM KTGWQKVGGA WYYLDSKGAM ITGWLKIDDV
QYYFRDSGAA AVGWVRFGDD WYHFGSSGAM QTGWLKSGGT YYYLKSSGVM ATGWQKVGGA
WYWFKDSGTM QTGWLKLNGT WYYFKSSGAM VTGSQVIGGK QYRFSSSGAM L
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