| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_07800 |
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| Symbol | |
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| ID | 8394671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 903382 |
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| End bp | 906051 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644985540 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_003143185 |
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| Protein GI | 257063513 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0367295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTATA TGACAACCGC GGAAATTCGC GAAAAGTATC TGAAATTCTT CGAGGGGAAG
GCCTGCAAGC GCCTGCCTTC TTCCTCCCTC ATTCCCGATG ATCCCAGCCT GCTGCTGACC
AGCGCCGGCA TGGTCCAATT CAAGCCCTAC TTCCTGCACG TCAAGGAATT CGATCCCGCC
TACGTGGGCG CCGCTACCGT GCAGAAGTGC GTGCGCACCA ACGACATCGA CATCATCGGC
ACCACCGGCC GTCACCTGAG CTTCTTCGAG ATGCTGGGCA ACTTCAGCTT CGGCAAGTAC
TTCAAGAAGG AGATGTGCGC CTGGGCATGG GAATTCTGCC TCAACGAGCT GGAGCTTCCC
AAGGAAAAGC TGTACTTCAC CGTGTTCGAG GACGACGACG AGACCATTGA GATCTGGAAG
AGCCTGGGTG TCGAGGACAG CCACATTTCC CGCCTCGGCG AGGACGACAA CTTCTGGCGC
GCCGGCCCCA CCGGCCCCTG CGGCCCCTGC TCCGAAATCT ACTACGACCA GGGTCCCGAA
TTCGGCTGCG GTGATCCCAA CTGCGCCCCC GGCTGCGACT GCGACCGCTT CCTGGAGTTC
TGGAACTGCG TGTTCACCCA GTACGACGGG CAGGAAGACG GCACGCTTGC GCCGCTGCCC
ACCAAGAACA TCGATACGGG CATGGGCCTG GAGCGCATGG CCGCCATCAT GCAGGGTGTC
CAGTCCAACT TCGACACCGA CGTCATCCGC GGCCTCATCG CGGTGGGCGA GCGCCTGAGC
GGCAAGTCCT ATGTGGGCAA GGCCAATACC GTGGGTCACG GCAGCGAGCA GGGCGATATC
GATCTGTCGC TGCGCATCTG CGCCGACCAC AGCCGCAGCG TTGCCTTCAT GATCGCCGAC
GGCATCCTGC CCTCCAACGA AGGCCGCGGC TACGTGCTGC GCCGTCTGCT GCGCCGCGCC
GTCATGCACG GCCGCAAGCT GGGCATCGAG GGCGCGTTCC TCAACGAGTA CGTGGCGGTC
ATCGTCGACC TCATGGGCCA TGTGTATCCT GAAATCGTTG AGAACCGTGC GCTGGTGGAA
AGCGTCATCG CCTCCGAGGA AGGCGCCTTC GCCAACACGC TGCGCCAGGG CCAGGCCTAC
CTGGCAGAGG CTCTGAAGAA CCTTGAAGGC ACCACGCTTT CCGGCGATGT GGCCTTCAAG
CTGCACGACA CCTACGGCTT CCCCGTGGAG GTCACCGAGG AGATTTGCTC CGAAAGCGGC
ATTTCCGTCG ACCACGCGCG TTTCGAGGAA TGCATGAACG AGCAGCGCGA GCGCGCCCGT
GCCGCCACCA AGGACGATGC CGAGGCTGCC TGGAGCACTT ACGGCAGCAT CTACGCCGAC
CTGCTCAAGG AGCTTGGTCC CACGAAGTTC GTGGGCTACG AAGGAACCGA TTACGAAGGC
GCCACCATCA AGGCCATCAT CCGCAACGGC GAGCTCGTCG GTTCGCTGCA TCGCGGCGAG
GAGGGCGAGA TTGTCCTCGA CACCACGCCG TTCTACGCTG AGATGGGCGG CGAGGTCGGC
GACACCGGCA TGCTGCACGG TACGTTCGGC GTGTCCGAGG TGCTGGACAC CAAGGCGCCT
GAGAAGGGCC TGGTCTGCCA CAGGGTCCGT GTCATCGAGG GCGACTGCCA CGCGGTGGAC
GAGACGGTGA ACGCTTCCGT CGACGCCCAG CGCCGCGCTC TCATCACCCG CAACCACACG
GCAACGCACC TGCTGCATGC CGCGCTGCGC GAGGTTTTGG GCGACCACGT GAAGCAGAAG
GGCAGCTACG TCGGTCCCGA CCGCCTGCGT TTCGACTTCA CCCACTTCGA GGGCATGACG
CCCGAGCAGA TCGCCGAGGT GGAGCGCGTC GCCAACGAGA AGGTCATGCA GGCCATTCCC
ACCACCATTT ACGAAACGTC CCTCAACGCC GCCCGCGAAG CCGGCGTCAC GGCCCTGTTC
GGCGAGAAGT ACGGAGATAC GGTCCGCGTC GTCGAGGCCG GCGAGTTCTC CCGTGAGCTC
TGCGGCGGCT GCCATGTGTC CAACACTGCC GAAATCGGCT TCATCAAAAT CGTGTCCGAG
GGCTCCAGTG CCGCCAACGT GCGCCGCATC GAGGCTCTGA CCAGCGTCGA GGCTCTGAAC
TACATGAACG CCGTCGAGGC CGAGCTGAAA GAAACCGCAG CCGAGCTGCG CGTCCCGATG
TTCGACGTAT CCGAGCGTAC CGCTTCGAAT CTGGCCACCA TCAAGGATTA CGAGACCAAG
GCCAAGAACG CCAAGAAGAT GGCTGCCGAA GGCAACATCG CCGAGCATGT CAAGGACGTC
GTGAACGTGG GTTATCCGCT GCTCGTCGTT CGCATCGACG GTCTGGACAC CGGCGGGTTG
CGCAACGCTT GGGATATCAT CCGTGCCCGC ATGGAAACCC CGGGTGCCTG CATCATCGGT
ACCGTCAACA ACGACAAGCC CATCATCATG GCGGCCGGCA CCGATGAGGC CGTGGCCGCC
GGATTCAACG CCGGTGCGGT CATTAAGAAC ATCGCCGGCA ACATCAAGGG CGGTGGCGGC
GGCAAGCCGA GCATGGCCCA GGCCGGCGGC AAGGACGCTT CCGGTCTCGA TGCCGCGCTG
CAAGCAGCCC GTGACATGCT CGGGGCATAG
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| Protein sequence | MRYMTTAEIR EKYLKFFEGK ACKRLPSSSL IPDDPSLLLT SAGMVQFKPY FLHVKEFDPA
YVGAATVQKC VRTNDIDIIG TTGRHLSFFE MLGNFSFGKY FKKEMCAWAW EFCLNELELP
KEKLYFTVFE DDDETIEIWK SLGVEDSHIS RLGEDDNFWR AGPTGPCGPC SEIYYDQGPE
FGCGDPNCAP GCDCDRFLEF WNCVFTQYDG QEDGTLAPLP TKNIDTGMGL ERMAAIMQGV
QSNFDTDVIR GLIAVGERLS GKSYVGKANT VGHGSEQGDI DLSLRICADH SRSVAFMIAD
GILPSNEGRG YVLRRLLRRA VMHGRKLGIE GAFLNEYVAV IVDLMGHVYP EIVENRALVE
SVIASEEGAF ANTLRQGQAY LAEALKNLEG TTLSGDVAFK LHDTYGFPVE VTEEICSESG
ISVDHARFEE CMNEQRERAR AATKDDAEAA WSTYGSIYAD LLKELGPTKF VGYEGTDYEG
ATIKAIIRNG ELVGSLHRGE EGEIVLDTTP FYAEMGGEVG DTGMLHGTFG VSEVLDTKAP
EKGLVCHRVR VIEGDCHAVD ETVNASVDAQ RRALITRNHT ATHLLHAALR EVLGDHVKQK
GSYVGPDRLR FDFTHFEGMT PEQIAEVERV ANEKVMQAIP TTIYETSLNA AREAGVTALF
GEKYGDTVRV VEAGEFSREL CGGCHVSNTA EIGFIKIVSE GSSAANVRRI EALTSVEALN
YMNAVEAELK ETAAELRVPM FDVSERTASN LATIKDYETK AKNAKKMAAE GNIAEHVKDV
VNVGYPLLVV RIDGLDTGGL RNAWDIIRAR METPGACIIG TVNNDKPIIM AAGTDEAVAA
GFNAGAVIKN IAGNIKGGGG GKPSMAQAGG KDASGLDAAL QAARDMLGA
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