Gene Shel_07770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07770 
Symbol 
ID8394668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp899753 
End bp901093 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content64% 
IMG OID644985537 
ProductRecombination protein MgsA 
Protein accessionYP_003143182 
Protein GI257063510 
COG category[L] Replication, recombination and repair 
COG ID[COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.138045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACAACC TGTTCACTGA GTTGGAAAAC GAAGCCAAAA TGGCCGTGGC CCCTCTTGCC 
GTGCGGATGC GTCCGCGCAC GCTGGACGAG CTCAAGGGTC AGCAGGAGGC CGTCGGCGAA
GGCAGCTGGC TGCATGCCGC CATCGCAGCG GACACGCTGT CGTCCATCAT CCTGTTCGGC
CCCGCCGGCA CCGGCAAGAC GAGCATCGCG CACATCATAG CGGAAACCAC GAGGGCCATC
TTCGTTGAGG TGTCGGCCAT CGGCGGCACC GTTTCCGACC TGCGCCGCGA GATCGCCGCG
GCCGAAAAAC GGCTCTACGC CACCGGCCGG CGCACCATCC TGTTCGTGGA CGAGATCCAC
CGGTTCAACC GTAGCCAGCA GGATGCGCTG CTGCATGCCG TGGAGAACCG TACGGTGGTG
TTGATCGGCG CCACCACGGA AAACCCGTTC TTCGAGGTCA ACTCGGCGCT CATATCACGC
TCCCGCGTGG TCGAGCTCCA TTCGCTGTCC GACGATGACA TCCGCCAGGT GCTGGACGCA
GCCCTTGCTG ACGAGCGCGG TTTGAAAGGG GAATTCGACC TTCTACCCGA CGCCGCAGAA
GCCATCGTCA CCCTGTCTGG AGGAGATGCC CGCGGTGCTC TGACCACCCT TGAGCTGGCA
AGCGGCCTGG CCCGCCAAGC CGTAGAGGAC GGCGCTGCTA AGACGCCCGA CGGGCGCATC
CCCATCACGG CAGACATGGT GCAGCTGGCA ACGCCCCACC GCGTTCTGCC TTACGACAAG
AACAAAGACA TGCACTACGA CATCATCAGC GCCTTCATTA AGTCGATGCG CGGAAGCGAT
CCCGACGCGG CGCTGTATTG GATGGCCCGC ATGCTCGACG GGGGAGAGGA CCCCAAGTTC
ATCGCCCGGC GCATTTACAT CCTGGCCAGC GAAGACATCG GCAACGCCGA TCCGCAGGCC
CTGCTCATCG CGGAGGCGGC GTTTAGGGCG GTCGAGGTCA TTGGACTTCC GGAATGCCGG
ATCAACCTGG CCCAGGCCGT CATCTACATG GCGCTTGCCC CGAAATCCAA CGCCTGCGAA
TCGGCCATCG ATGCTGCGCT GTCCGAGGTC CGCCATGGCC CGAAACGCGA CGTGCCCAGC
TACCTGCGGG ACCGCCATCG CCCTGGCGCC GAGAACTACG GCCGGTACCT GTATCCCCAC
GACTACCCTG GCCACTGGGT CGACCAGCGG TACCTTCCGG ACGGTCTTGA GAAGGGCTGC
TTCTACCAAC CTGGCGAATC CGGTTGGGAA GCGTATCGTG TGGATGCGAC CTCTCGCGAC
AGAAAGCGGC CGAATCAGTG A
 
Protein sequence
MDNLFTELEN EAKMAVAPLA VRMRPRTLDE LKGQQEAVGE GSWLHAAIAA DTLSSIILFG 
PAGTGKTSIA HIIAETTRAI FVEVSAIGGT VSDLRREIAA AEKRLYATGR RTILFVDEIH
RFNRSQQDAL LHAVENRTVV LIGATTENPF FEVNSALISR SRVVELHSLS DDDIRQVLDA
ALADERGLKG EFDLLPDAAE AIVTLSGGDA RGALTTLELA SGLARQAVED GAAKTPDGRI
PITADMVQLA TPHRVLPYDK NKDMHYDIIS AFIKSMRGSD PDAALYWMAR MLDGGEDPKF
IARRIYILAS EDIGNADPQA LLIAEAAFRA VEVIGLPECR INLAQAVIYM ALAPKSNACE
SAIDAALSEV RHGPKRDVPS YLRDRHRPGA ENYGRYLYPH DYPGHWVDQR YLPDGLEKGC
FYQPGESGWE AYRVDATSRD RKRPNQ