| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_07700 |
|---|
| Symbol | |
|---|
| ID | 8394661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 891906 |
|---|
| End bp | 893210 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644985530 |
|---|
| Product | alanine racemase |
|---|
| Protein accession | YP_003143175 |
|---|
| Protein GI | 257063503 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0787] Alanine racemase |
|---|
| TIGRFAM ID | [TIGR00492] alanine racemase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.282075 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATCG ACACTAACAA TTTCAACGCA TTCGGAGCCC AGCCGATCAA GGCGAACCCC
ATGGGTTCCA GCTCGGCGGC GTTTCGCGGC ACGGCATCCC AGGCAGGGGA GAGCGCGAAG
TTTGCTGCAT CCTACGGACA GGCCCGCCTA GACGCCATCC CCGGCGACGA CCAGCGGTGG
TCTTGGGTCG AGGTGGATCT GGGCGCCATC CGCAACAACG TGCAGGTGGT CAAGCGCATC
ATTCCTGCCG GCTGCAGGTT CATGGCGGTA GTCAAGGCAG ACGGTTACGG CCATGGGGCC
GTCGAAGTGG CCCGTGCGTC CATCGCCGCC GGCGCCAACC AGCTGGCGGT GGCCGGCGTC
TACGAGGCCG TCGAACTGCG CAAAGCGGGC ATTACGGCTC CTATCCTGGT GCTGTCCGAA
CCTCCTGCCG AGTCCATCCC TCTGCTGCTC GCCTACGACA TCATGCCGTC GGTGTACTCG
GCCGAGTTCG CCATCGCCTA TGCTGAAATG GCCGACCTGC ACGGCATGCG TGCCCCGTAC
CATCTGGCCG TCAACACGGG CATGAACCGT ATCGGCGTGC GCTTCGACGA GGTCATCGAC
TTCTGCCGCC AGGTGGAATT CCACCGTGCG CTGGACCGTG TGGGCACCTT CACTCACTTC
GCGACGGCCG ACTGTGCCGA AACCTTCGAC TTCAGCCTGC AGTTCCGCCG GTTCTGCGAG
GTCATCGATG GCATGCGCCA GGTGGGGCTC GACCCGGGCA TCGTGCACTG CGCCAACTCC
GCGGCAACGC TGCGTTACCC CCAGACCCAT CTGGACATGG TCCGCTTCGG CATCTCACTG
TACGGCTACC ATCCCTGCAT CGAGACCCGC GGGCACTTCG ACCTGCGTCC CGCCATGAGC
CTGCATGCCC GCATCACGGC GGTCAACACG CCGCCCATGA GCGAAGGCGT GAGCTACGGC
CTGCATTACC GCAGCCCCGG CAGCGTGAAG ATCTGCGCCG TGCCCGTGGG GTATGCCGAC
GGATTCAGCC GCGGCCTGTC CGGACGCACC GCGTTCATCT ACGGAGGCCG CCTGTGCAAG
CAGGTGGGCA ACATCTGCAT GGACCAGTGC ATGTTCGAAG TCGACCTGCG CACGTCCGCC
ATGCGCTCGC GCCTCGACCC GCATGTGGGT GACGAAGTGG TGCTCTTCGG CAGCAAGGAC
GGCTGCACCA TCTACGTGGA GGACCTGTGC GACGTGTTGA ACACCATCCC GCACGAGATC
ATCTGCGCCA TGTCTTTGCG CATGCCGAAG GTGTACCTGA AATGA
|
|---|
| Protein sequence | MAIDTNNFNA FGAQPIKANP MGSSSAAFRG TASQAGESAK FAASYGQARL DAIPGDDQRW
SWVEVDLGAI RNNVQVVKRI IPAGCRFMAV VKADGYGHGA VEVARASIAA GANQLAVAGV
YEAVELRKAG ITAPILVLSE PPAESIPLLL AYDIMPSVYS AEFAIAYAEM ADLHGMRAPY
HLAVNTGMNR IGVRFDEVID FCRQVEFHRA LDRVGTFTHF ATADCAETFD FSLQFRRFCE
VIDGMRQVGL DPGIVHCANS AATLRYPQTH LDMVRFGISL YGYHPCIETR GHFDLRPAMS
LHARITAVNT PPMSEGVSYG LHYRSPGSVK ICAVPVGYAD GFSRGLSGRT AFIYGGRLCK
QVGNICMDQC MFEVDLRTSA MRSRLDPHVG DEVVLFGSKD GCTIYVEDLC DVLNTIPHEI
ICAMSLRMPK VYLK
|
|---|
| |