| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_07520 |
|---|
| Symbol | |
|---|
| ID | 8394643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 874063 |
|---|
| End bp | 874875 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644985512 |
|---|
| Product | ABC-type cobalt transport system, permease component CbiQ |
|---|
| Protein accession | YP_003143158 |
|---|
| Protein GI | 257063486 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.508014 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAGCT ACATCGACCA AGACTCCTGG CTGCACCGCC GCAACCCGAC GATGAAGTTC
GTTCTCATGC TGGCCGTCAC CGTAGTCATC TGCCTTTCGT ACTATCCCAT CCTGCCTATA
TCGACGGTTG TGCTGGTCGT CGCGTTGACA TGCATCGGCG GCCGCATTTC GCCAAAGGTG
TTTTTGGGCC AGCTGAAAGC GTTCATCTTC ATCGCGGCCG TGTTCATGGT TTCCATGACC
GTTCTCCGCG GTCTGAGCTA TTCGCCCGAC ACCTTGTACG CCTGGGGACC TTTCACCTGG
TCGCGAATGG ACCTCATCAA CATTCTTACT TTAGGATTCC GCATCATGGC CTTCGTAGCG
ATGTCGGTTG CTTTCGTGGC CACCACACGA CCTCGCGACA TCGTGCTCAG CCTTATCGGG
CAATGCAAGC TCGACCCGGT GCGGGGCTTC GCCATCATGG CGGCTTACCG CTTCCTTCCT
GAGCTGCAAG ATCACGTTCA AACCATCCGC CTTGCCCAGC GCATTCGCGG CATCGAGAGC
AACGACGGCC TCCTGAATAG GCTTGCTTCG CCGTTCAGGT TGATATTGCC CCTGTTCTGC
CTGGCCGCGC GCCGCGGGGA TTCCATAGCC TGCGCCATGG AGAGCCGCGG GCTTGGCGGA
ACGGAGCGCA CGTATTGTCA TGAGGCTCGC ATCGATTCGG GCGACTGGGT GTTTGCGGCA
GGTGTGGTGG TTGTATATGC TGCCCTTATA ATCGCGCTCG TGTATATGGG CGCATTCCAT
TTCAGTGTAA ATGTTCAAAC GTTTGGAAGG TAA
|
|---|
| Protein sequence | MFSYIDQDSW LHRRNPTMKF VLMLAVTVVI CLSYYPILPI STVVLVVALT CIGGRISPKV
FLGQLKAFIF IAAVFMVSMT VLRGLSYSPD TLYAWGPFTW SRMDLINILT LGFRIMAFVA
MSVAFVATTR PRDIVLSLIG QCKLDPVRGF AIMAAYRFLP ELQDHVQTIR LAQRIRGIES
NDGLLNRLAS PFRLILPLFC LAARRGDSIA CAMESRGLGG TERTYCHEAR IDSGDWVFAA
GVVVVYAALI IALVYMGAFH FSVNVQTFGR
|
|---|
| |