| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_07090 |
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| Symbol | |
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| ID | 8394600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 823309 |
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| End bp | 824424 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644985470 |
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| Product | diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase |
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| Protein accession | YP_003143116 |
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| Protein GI | 257063444 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD
[TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.312982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAG ACGAGAAGAT GATGCGCCGG GCAATCGAGC TGGCTCGCAC GGCTGCGGGC
TGGACCAATC CGAATCCGCT GGTTGGAGCC GTCATCGTAA AGGACGGCCG CGTTATCGGC
GAAGGTTGCC ACGAGCGTTA CGGCGACTTG CACGCCGAAC GCAACGCATT GGCGTCGTGC
ACCGAATCGC CGCAGGGCGC CACCATGTAC GTGACGCTCG AGCCCTGCAG CCACACCGGA
AAACAGCCTC CGTGTGCCGA CGCGTTGGTC GAAGCGGGAA TCGCGCGGGT GGTCGTGGGT
TCGCGCGACC CCAATCCGTT GGTGTCGGGT CGCGGCATTG CACGGCTGCG CGCCGCCGGC
ATCCAGGTGG AAGAGGACTT CCTCCGCCAG GAGTGCGACG GGATCAATCC CGTGTTCTTC
CATTTCATCA CGACGAAGAC GCCTTATGTG GTAGCCAAGT GGGCCATGAC CGCCGATGGG
AAGATCGCCA CGGCAACCCG TGATGCCAGG TGGGTCTCCT GCGAAGCATC CCGCGCCGAC
ACCCATGAGC TTCGACACCG TCTGGCCGGC ATCATGGTCG GCGTCAACAC GGTGCTCGCC
GACGACCCCA TGCTCAACGC GCGGCGCGGC GTGCCAAGCA ACCAGCCGTT GCGCATCGTG
TGTGACTCGT CTTTAAGGAT TCCGCTGGAC AGCGCTCTTG TGCGCTCGGC AACCGAAGTG
CCCGTGCTTG TGGCGTGCGC CTGCAACATC GACCAAGGGG AACGCCTGGA TAAGGCTATC
CGTTTGCGGG CGGCCGGCGT CGACGTGGTG TCGCTTCCGG GGGCCGACGG CAAGGTGGAC
CTTGCCGCTC TTATGGCGCA TCTGGGCGAA TCGGGCGTCG ACTCCGTCCT GGTGGAGGGC
GGTGGCACCC TGCACGCGAA CATGTTCAAA AGCGGCCTGG TCGACGAGGT GGTCGTTTAC
CTTGCACCCA AGGTGTGCGG TGGCACGAGC GCACCGACCC CTGTGGGCGG CGCGGGAGCG
GCCCTTATGG CTGACGCCCT TCAATTGGGA AAACCCCAGG TAGACATCGT GGGCGACGAC
GTCCGTCTGA CATATCGACT GAATCGAGGG ATTTAG
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| Protein sequence | MTADEKMMRR AIELARTAAG WTNPNPLVGA VIVKDGRVIG EGCHERYGDL HAERNALASC
TESPQGATMY VTLEPCSHTG KQPPCADALV EAGIARVVVG SRDPNPLVSG RGIARLRAAG
IQVEEDFLRQ ECDGINPVFF HFITTKTPYV VAKWAMTADG KIATATRDAR WVSCEASRAD
THELRHRLAG IMVGVNTVLA DDPMLNARRG VPSNQPLRIV CDSSLRIPLD SALVRSATEV
PVLVACACNI DQGERLDKAI RLRAAGVDVV SLPGADGKVD LAALMAHLGE SGVDSVLVEG
GGTLHANMFK SGLVDEVVVY LAPKVCGGTS APTPVGGAGA ALMADALQLG KPQVDIVGDD
VRLTYRLNRG I
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