| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_06560 |
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| Symbol | |
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| ID | 8394548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 767572 |
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| End bp | 768447 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644985418 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_003143064 |
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| Protein GI | 257063392 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGAAC CACAACGCAT CACAGGCCAT ACGCATCTGA TTACATTGCT GGGCAGTCCG
GTGGCCCATT CGTCATCCCC AGTGACGCAC AACCTGTCGT TCGAAAAGCT GGGTATCGAC
ACGGTCTACC TGTGCCTGGA AATCGGAGCC GACGAGGTAG GCGAGGTCGT CAACGGGCTC
AAGCGCACCG TAGGCTGGGA CGGATCTAAT GTAACCATGC CTTGCAAGAA CGCCGTTATC
CCGTTTTTGG ACGAACTTGA TCCCGCTGCT GAACTCATGG ACGCAGTGAA CGTCATCAAG
AACGACAACG GCAAGCTCAA AGGCTACAAC ACCGACGGAG CGGGATTCGT CTGGGGTATG
CGCCAGAAGG GCGTCGACCC CGCAGACAAG ACCGTTACGC TGATCGGGCC CGGCGGGGCC
GGCTCTGCCG TCGCCGTGCA GCTGGCGTTG GATGGCGCGA AGAAGCTCAA CGTGGTCGGT
CGACAGGGGA AGACCTTCGA GCGCGCCCGC GACCTGGTGC CGCGAATCGT GGAGAAGACG
GGCTGCGACG CCCAGCTGTT CGACATCGCC GATCAGGACA ACCTGCGTAA GCTGATTGCC
GAGTCCGACG TTTTGGTGAA CGCCAGCAAC GTCGGCATGG GCGCGGGCAG TACCGAGTCT
CTGGTCCCCG TGGATTATCT GCGTCCTGAA CTGGTAGTAT GCGATACCGT ATACTTCCCG
CGCGAGACCC AGCTCATCCT GGACGCCAAG GCATTGGGAT GCGTGACCGT TCCTGGCTTG
GGCATGATGA TCGGCCAGGC AGCCGAAGGC GAGAGGATCT GGTACGACGC CGAGATGCCC
GTCGACTTCA TCGTCGAGCA GTTGTTCAGC GAGTAG
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| Protein sequence | MGEPQRITGH THLITLLGSP VAHSSSPVTH NLSFEKLGID TVYLCLEIGA DEVGEVVNGL
KRTVGWDGSN VTMPCKNAVI PFLDELDPAA ELMDAVNVIK NDNGKLKGYN TDGAGFVWGM
RQKGVDPADK TVTLIGPGGA GSAVAVQLAL DGAKKLNVVG RQGKTFERAR DLVPRIVEKT
GCDAQLFDIA DQDNLRKLIA ESDVLVNASN VGMGAGSTES LVPVDYLRPE LVVCDTVYFP
RETQLILDAK ALGCVTVPGL GMMIGQAAEG ERIWYDAEMP VDFIVEQLFS E
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