Gene Shel_06310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06310 
Symbol 
ID8394523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp735822 
End bp736937 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content58% 
IMG OID644985393 
Producthypothetical protein 
Protein accessionYP_003143039 
Protein GI257063367 
COG category[S] Function unknown 
COG ID[COG3274] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCAAT CAGAAGGTTC CTGCCAAGCG AGCGAGATCG CGGGCGGTTC CGGCCGGCCT 
GATGGCGGTG GGGCGCCGTC CCAGCCGAAG CAACGGATAC GGTATCTGGA TACGTTGCGC
GTTATCGCCA TCGCGTTCGT CCTTGTCAAC CATACCGTCG GACCATGGAT GCTGTCGTTG
CCCGACCAGA CCCTGAACTG GTGGTTCGGC GTGACATATT TCTTCATGTG CAAGTTCGCC
GTGCCGTTGT TCGTTATGAT TTCGGGCGCC CTGCTGCTGC GAAAGACCGA CCCCTATCAA
AAAACCGGGA GGCGCATCGT GCGCATCGTG AAGGCGCTCG TCCTGTTTTC GGTCTTCTAC
TATTTCGTCA ATCAGACCTC CTACAGCCTC ATCGATTTCG TCGATCGGTT CTGGCATGCG
GGCATATGCG CACCGCTTTG GTATCTATAT ATGTATCTCG GCTTGCTTAT TATGCTGCCG
TTGCTGCAAC GCCTTGCGTC CGTCATGCGC AATCGGGACT ACCTGTATTT TTTCGCTATC
AGCCTGGGGA TTGTCAACCT CTTGCCGGTC GTCGCGGCGT TCTCGCCGTC GTTCGAGCCG
ACCTCGTATT TCCAATTGCC GCTGTTCACA GGGTTCGTCG GTATGTTTTT CGGCGGACAT
TACCTGGCGA ATGTGGCGAA AGTCACGCGC CGGCACGCGG TTATCGCCGC AGTGGTGTTT
CTGGTCTGTC TTGCGTTTCT GGTGGCGTCT ACGGACTACT TCTACCAGGT CAACGGTGGG
AAGGGGTACC TTGCCATGGA CAACAGGACG TTTTCGCCCA TCATGCTCAT GGCGGCTTGC
GTGTTTGTGG TCGTGCGCTG GCGTGAGGAT GCTCGGGCCG GGCGGCCGGC AAGCTCCGCC
GCGCAGCACG TCATCCGCGA GCTGGCGCTC TGCTCCTTCG GCATCTACCT GGTCCATCCG
TACTTCGTCA CCTTAATGAA GCCGTATTTC GTGCAGGCTG CCGCATCGGC CCCCGATGTT
TTCGCCTTGC TGGTATATCA GCTGGTCCTG TTCGCGGTGT CGTTTGCGGC AACGTGGCTT
TTGCGCCTGA TTCCACCTGG TCGCGACATC CTGTAG
 
Protein sequence
MHQSEGSCQA SEIAGGSGRP DGGGAPSQPK QRIRYLDTLR VIAIAFVLVN HTVGPWMLSL 
PDQTLNWWFG VTYFFMCKFA VPLFVMISGA LLLRKTDPYQ KTGRRIVRIV KALVLFSVFY
YFVNQTSYSL IDFVDRFWHA GICAPLWYLY MYLGLLIMLP LLQRLASVMR NRDYLYFFAI
SLGIVNLLPV VAAFSPSFEP TSYFQLPLFT GFVGMFFGGH YLANVAKVTR RHAVIAAVVF
LVCLAFLVAS TDYFYQVNGG KGYLAMDNRT FSPIMLMAAC VFVVVRWRED ARAGRPASSA
AQHVIRELAL CSFGIYLVHP YFVTLMKPYF VQAAASAPDV FALLVYQLVL FAVSFAATWL
LRLIPPGRDI L