Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_05900 |
Symbol | |
ID | 8394482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 688375 |
End bp | 689466 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644985352 |
Product | hypothetical protein |
Protein accession | YP_003142998 |
Protein GI | 257063326 |
COG category | [S] Function unknown |
COG ID | [COG1915] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00300] conserved hypothetical protein TIGR00300 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.598804 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTTG CTTTGAATAC GTATATGGCG CCCGATTTCG AATGCACGAC TTTCGAAAAC GCTCCCGATG TCGTGATGAA ACGCGTGGCG GCGGACGGCG TGGCTCCCGA GAACTACCAT GCCATGAGCA TCTTTCCCGA GTATTTCAAG ATCGACGGCC AATGGCACCT GGCCGAGGAA AGCCGCATGG ACTGCGTCCC CGTGTGGGAA GACGGCCGCG TGCACGTGCG CGAATTCCGG CACCTGCGCG TCGGCGACCT GGTCATTTGC GGTCGGCAGG AAACCGGTGA GGAAGGCATC TACGTGCATC CCGACGGATT CCGAACCGCC GAGGCCATGG CCGAGCGCTT CGCGTTCCGC CAGAACCGCT CTCGCGAAAC CGCTTACTCC AAGGTCTACG ACGACCTGTA CGAGCTCCTC AAATACGAGC GCGACAACGG TTACATCGTG TGGGTCATGG GGCCGGCGTT CGCCTTCAAC GGGTACTCCC GCGAGGCCTT CGCCCGCGTG GTGGAAGGCG GCTACGCCCA TGCCGTGCTG GCAGGCAACG CTCTGGCCAC CCACGATTTG GAGGCCGCGT ACCTGGGAAC TGCCCTGGGC CAGGATGTGA ACACCCAGAT GAACATGGCG GGCGGCCACT ACAACCACCT CGACACCATC AATAAGATGC GCGAATCGGG CTCTATCGGG GCGTTCATCC ACAAGCAGGG CATCGACAAC GGCATCATGC ACGCGCTGGA AACCCGCCAC GTGCCCTATG TGCTGGCTGG ATCCATCCGC GACGACGGCC CGCTGCCCGG GGTGTACGGC GACGCGTACG CAGCTCAGGA CGCCATGCGC GAACACGTGA GCAAGGCCAC CACGGTCATC TGCATGGCCT CGATGCTGCA CTCCGTCGCC ACCGGCAACA TGACGCCGTC GTTCCGCGTG CTGCCCGACG GCACGGTGCG CCAGGTGTAT TTCTACTGCG TCGACATCGC CGAATTCGTG GTGAACAAGC TGGTCGATCG CGGGTCGCTG GCATCCAAGG GCATCGTCAC CAACGCCCAG GACTTCATCG GTCTGGTGGC CAAAGGGCTC GACCTGCTGT AA
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Protein sequence | MAFALNTYMA PDFECTTFEN APDVVMKRVA ADGVAPENYH AMSIFPEYFK IDGQWHLAEE SRMDCVPVWE DGRVHVREFR HLRVGDLVIC GRQETGEEGI YVHPDGFRTA EAMAERFAFR QNRSRETAYS KVYDDLYELL KYERDNGYIV WVMGPAFAFN GYSREAFARV VEGGYAHAVL AGNALATHDL EAAYLGTALG QDVNTQMNMA GGHYNHLDTI NKMRESGSIG AFIHKQGIDN GIMHALETRH VPYVLAGSIR DDGPLPGVYG DAYAAQDAMR EHVSKATTVI CMASMLHSVA TGNMTPSFRV LPDGTVRQVY FYCVDIAEFV VNKLVDRGSL ASKGIVTNAQ DFIGLVAKGL DLL
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