Gene Shel_05880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_05880 
Symbol 
ID8394480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp685905 
End bp686405 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content67% 
IMG OID644985350 
Productnitroreductase 
Protein accessionYP_003142996 
Protein GI257063324 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCTA TCTACAAACG CGCCAGCGTA CGCACCTACG CCGACAAGGA CGTGCCCGAC 
GAGCTGGTGG AACGCCTGCT ACGCGCCGCC ATGGCAGCAC CCTCGGCCGG AAATCAGCAG
CCCTGGGAAT ACTTCGTGGT GCGCGACGCC GACATACGCC AGAAGCTGGC CGACGCCTCG
CCCTACGCCA AGCCCTCGGG ACGGGCGCCC GTGGTGTTCG TGGCCTGCTG CCGGACAGAG
GGCACGCGCT TTCCCGAATG CGACACCCAC GACATGGCAG CCTCGGTGGA AAACCTGCTG
CTTGAAGCCG CCGACCTGGG GCTGGGCTGC GTTTGGATGG CTGTCGAACC TTTCGAGGAC
CGCATGGCGG CCACGCTTGA GGCGCTGGGC AATCCCCAGG GGCTGCGTCC CTTCGCGCAA
ATCGCCTGCG GGTGGCCCGA AGGCGAAGTG GCCGCCCACG GCGCCGAGCG TTACGACGAA
TCCCGCGTCC ACTGGCTGTA A
 
Protein sequence
MEAIYKRASV RTYADKDVPD ELVERLLRAA MAAPSAGNQQ PWEYFVVRDA DIRQKLADAS 
PYAKPSGRAP VVFVACCRTE GTRFPECDTH DMAASVENLL LEAADLGLGC VWMAVEPFED
RMAATLEALG NPQGLRPFAQ IACGWPEGEV AAHGAERYDE SRVHWL