| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_05690 |
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| Symbol | |
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| ID | 8394461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 662501 |
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| End bp | 663313 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644985331 |
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| Product | sortase family protein, LPXTG-site transpeptidase |
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| Protein accession | YP_003142977 |
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| Protein GI | 257063305 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCTTGA CGTTGTTCTT CCTGTTCGGG GTGGGCGTTA TGGCATATCC GTTCGCGTGC
AACGTGGCCA ATGAGTACGC AAACGCGCGC GCGGCGGCCG CTTACGGCAA TGCAATTGCT
GAAACGCCCA ACGAGGAAAC CCAGGCGGCC TGGGAAGCGG CCCGTGCGTA CAACGAGGCG
CACACGGCCA ACACGATTGT GGACCCGTTC GACGAAGAGG GCGAATACCC CGAATCGGAA
GACGGCTATT GGGAAGTGCT CGATCCCACG GGAAACGGTG TCATGGGGTA CATCGACATC
CCGAAAATCG GGCTGAGGCT GGCTATCTAC CACGGCACGA GTGCGAAGGC GCTCGAGCAG
GGTGTAGGGC ATTTGCAGGG AACGAGCCTG CCAGTCGGCG GTGCCGGGAC GCATTGCGTG
TTGTCCGGGC ACCGCGGGCT GGCCACAGCC AAGTTGTTCA CGGACTTGGA CCAGCTGGAG
GTTGGAGACC AATTCTATCT CCATGTGCTG GACCAGGTGC TCGCCTATGA GGTGGACCAA
GTGCTTGTGG TGACGCCTGA TCAGGTTGAT GCTTTGGCGA TTGTCGAAGG CGAAGACCTG
GTGACGCTGG TCACGTGCAC GCCGTATGCA GTCAACACGC ATCGGATGCT TGTGCGGGGC
CACAGCGTCG AATACGTGCC GTACGAGGAG CGCACGCCGG TTCAGGCAGC GGCGGCTTTC
GAGCCGTGGC AGCTGGCTGT AGCGGGCGGC GTGATCGTGC TGGTGTTGCT GGCGGCATAT
ATCGCGGTCA CAAGAAGGCC GTCGAGAAGA TAG
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| Protein sequence | MLLTLFFLFG VGVMAYPFAC NVANEYANAR AAAAYGNAIA ETPNEETQAA WEAARAYNEA
HTANTIVDPF DEEGEYPESE DGYWEVLDPT GNGVMGYIDI PKIGLRLAIY HGTSAKALEQ
GVGHLQGTSL PVGGAGTHCV LSGHRGLATA KLFTDLDQLE VGDQFYLHVL DQVLAYEVDQ
VLVVTPDQVD ALAIVEGEDL VTLVTCTPYA VNTHRMLVRG HSVEYVPYEE RTPVQAAAAF
EPWQLAVAGG VIVLVLLAAY IAVTRRPSRR
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