Gene Shel_05630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_05630 
Symbol 
ID8394455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp653204 
End bp653902 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content56% 
IMG OID644985325 
Producthypothetical protein 
Protein accessionYP_003142971 
Protein GI257063299 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.502408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA TCATCATTCT CGCCGTTACC ATTGCGGCAT GCTTTGCTCT TCGTAATCCC 
ATCAAGAAGG CCCCCATGGC CTTCTATGTG CTGTCGGTTT TGGTTGTTGT GGCGTTTCTC
ATGCTCGACC AGCTGGGCGC ATCCCGCGCT GTAAGGCTGG CGTTCTTCTG GACCATGCAG
AAGTGTCTGG TGCCGCTGGC TTTGTTCATC GTGGTCATGT ACATCGGCGT ATTCTCACGC
TCGTCCAAGG TGTCCCTGTG GCTGAGGCCC ATTCGCGCCG AGCTGTCCAT TATCGCGTGG
ATCCTGTCGC TGGGTCATGT GGTGCGCTAC CTTCAATCGT ATCTGAACCC CCTGTTCAGC
GGTGTGTCCT TAAAGGTGAA CATCATTCTG GGCATCATCG TGGCCATCGT CCTGTTCATT
CTGCTTATCC TGCTCGGCGT GACGTCCTTC AGGTTCGTCA AGAAGCGCAT GTCCACCGAC
GCTTGGAAGA ACCTGCAGAA GCTGGCCTAT CCGTTCTTCG CGCTTACCTA TGTGCATCTG
CTGTTCCTGC TTATGCCCAG CGCAATGCAC GGCGGCAAAG CCGCTACGTT CTCGGTAGCC
TTGTACTCGG TGATCTTCAT CGCGTACTTC ATCCTGCGTC CGCTTCGCGC GATTCAGGAC
CGCAAAGCCG CATCGGAGCC GGCAGCTGTT GAGGGATAA
 
Protein sequence
MNTIIILAVT IAACFALRNP IKKAPMAFYV LSVLVVVAFL MLDQLGASRA VRLAFFWTMQ 
KCLVPLALFI VVMYIGVFSR SSKVSLWLRP IRAELSIIAW ILSLGHVVRY LQSYLNPLFS
GVSLKVNIIL GIIVAIVLFI LLILLGVTSF RFVKKRMSTD AWKNLQKLAY PFFALTYVHL
LFLLMPSAMH GGKAATFSVA LYSVIFIAYF ILRPLRAIQD RKAASEPAAV EG