Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_05630 |
Symbol | |
ID | 8394455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 653204 |
End bp | 653902 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644985325 |
Product | hypothetical protein |
Protein accession | YP_003142971 |
Protein GI | 257063299 |
COG category | [S] Function unknown |
COG ID | [COG2717] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.502408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCA TCATCATTCT CGCCGTTACC ATTGCGGCAT GCTTTGCTCT TCGTAATCCC ATCAAGAAGG CCCCCATGGC CTTCTATGTG CTGTCGGTTT TGGTTGTTGT GGCGTTTCTC ATGCTCGACC AGCTGGGCGC ATCCCGCGCT GTAAGGCTGG CGTTCTTCTG GACCATGCAG AAGTGTCTGG TGCCGCTGGC TTTGTTCATC GTGGTCATGT ACATCGGCGT ATTCTCACGC TCGTCCAAGG TGTCCCTGTG GCTGAGGCCC ATTCGCGCCG AGCTGTCCAT TATCGCGTGG ATCCTGTCGC TGGGTCATGT GGTGCGCTAC CTTCAATCGT ATCTGAACCC CCTGTTCAGC GGTGTGTCCT TAAAGGTGAA CATCATTCTG GGCATCATCG TGGCCATCGT CCTGTTCATT CTGCTTATCC TGCTCGGCGT GACGTCCTTC AGGTTCGTCA AGAAGCGCAT GTCCACCGAC GCTTGGAAGA ACCTGCAGAA GCTGGCCTAT CCGTTCTTCG CGCTTACCTA TGTGCATCTG CTGTTCCTGC TTATGCCCAG CGCAATGCAC GGCGGCAAAG CCGCTACGTT CTCGGTAGCC TTGTACTCGG TGATCTTCAT CGCGTACTTC ATCCTGCGTC CGCTTCGCGC GATTCAGGAC CGCAAAGCCG CATCGGAGCC GGCAGCTGTT GAGGGATAA
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Protein sequence | MNTIIILAVT IAACFALRNP IKKAPMAFYV LSVLVVVAFL MLDQLGASRA VRLAFFWTMQ KCLVPLALFI VVMYIGVFSR SSKVSLWLRP IRAELSIIAW ILSLGHVVRY LQSYLNPLFS GVSLKVNIIL GIIVAIVLFI LLILLGVTSF RFVKKRMSTD AWKNLQKLAY PFFALTYVHL LFLLMPSAMH GGKAATFSVA LYSVIFIAYF ILRPLRAIQD RKAASEPAAV EG
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