Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_05550 |
Symbol | |
ID | 8394447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 641968 |
End bp | 642654 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644985317 |
Product | hypothetical protein |
Protein accession | YP_003142963 |
Protein GI | 257063291 |
COG category | [S] Function unknown |
COG ID | [COG1556] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGCA ACAAGACCCT TGAAGACCTG TTGAGGCCCA TATCCGAAAG CCTTGGGCGC GCCGAAGTTC CGTCGCAGGT CAACCGAGAT AAGGATGCGT ATCCTCTGCC GCGTCGCGTG ACCGACGGCA TGGATGCCGC CGCGCTGACG GACCTGTTCG CCTCCGAGGC GGGAAAGATC CGCGTAACCG TGCACCGCTG CGCAGCGGGC GAGGCCCCTC AGGTCGTGGC CGGCATTGTG GCCGAAGAGC CCGGCGACGT CGTGCTCGCA GGCGACAATC GGCTGGCTGC CCTGGACCTG GTTCCCGCCG TCACGCAGGC TGCCGCCGGC AACGCCGTGA CCGTTTGGAA TCCGAATGAT GCCAATGCGG TGGCTTCGGC CGAAAAGGCC CGGTACGGCG TGACCTTCGC CGCGGCTGGC ATCGCCGAGA CCGCCACCGT CGTGCAGCCC GCCAGCACCT TGTGCGGCCG CTCCGTAAGC CTGCTTCCGC TTACGCACAT CGCCGTTGTG GATGCCGCCG ACATCGTTGG CACTATGGCG GATTACCTGC GAACCGTGGA CAAGGATGCG CTGCCGTCGC AGATCTGCTT CATCAGCGGG CCTTCTGCCA CGGCGGACAT CGAGCTTGTG CGTGTCGAAG GCGTGCACGG CCCCATGTAC GTTCACTACG TCATTCTGGA AAATTAA
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Protein sequence | MIGNKTLEDL LRPISESLGR AEVPSQVNRD KDAYPLPRRV TDGMDAAALT DLFASEAGKI RVTVHRCAAG EAPQVVAGIV AEEPGDVVLA GDNRLAALDL VPAVTQAAAG NAVTVWNPND ANAVASAEKA RYGVTFAAAG IAETATVVQP ASTLCGRSVS LLPLTHIAVV DAADIVGTMA DYLRTVDKDA LPSQICFISG PSATADIELV RVEGVHGPMY VHYVILEN
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