| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_04920 |
|---|
| Symbol | |
|---|
| ID | 8394384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 577831 |
|---|
| End bp | 580092 |
|---|
| Gene Length | 2262 bp |
|---|
| Protein Length | 753 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644985255 |
|---|
| Product | predicted ATP-grasp enzyme |
|---|
| Protein accession | YP_003142901 |
|---|
| Protein GI | 257063229 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3919] Predicted ATP-grasp enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAATG TGAAGGACAT ATCCTTCGAC GAACTTACCG CTCACGCCGC CAGGCTTGGG
CTTGCCTTGC CTATCGAGCA GACCGAAGTG TGGGCCCGCT ATCAGGAAAC GATTCCCGGT
CGCACGCCTT GGGGCGTAAT CGCCGTGTGC GTGGGGGACA CCCCCATCGC CTTCGCGTCC
CTGTTCAAGT ACGCCATGCG CGGCTACACG TTCCTGCGTT CGCACCATGG CCTGCTGTGG
GCCTACGAGC CCTCCGAACA GGAGGAGCGT GACGCGCTTG AGGCCGTGGC GAAACACGTG
CATGCCCGGG AGCGCGGCTT GGCGTTCATT CGTTTCGGGG TGCTGCATGA CCTGGACATA
TGCCGTCCAG TGCTTTCATC CATCCCATAC GACACCACCG TGGTAATGGA CATTTCCGGC
GACCAGGACG AAATTATCGG CCGCATGAAG AAACGCGGCC GCCGCGACGT GCGCAAAGCG
CTGCGTGAAA GCCCCATCGT CTGCACCGAC GAAACCGAAG CGGGCATGCA GGACTTTTCC
GAGTACTACG ACGTCATGCG CGAAACCGCC GAGCGCGACG GGTTCTCGCC GTCACCCATG
AGCGACTACC AGGACATGCT GCGCATTCTG GGGCCCGACC ACGTCCGCCT GTTTGTTGGC
CGCATCGAAG GCAAGGTTGT GAATTGGGAA ATCGACACCA TGAACGACGG CCATGCGGTG
CGCTACTACG CCGCCAGCCG CAGCGAGTTC GCGCGTCTGC TGGTGGCCGA CCGCCTGCTG
CTGCACGCCT GCGTGGAGCT GTCCCGCCTG GGATGCACCA CTTTGGACCA CATGGGCATG
GGCAGCGACG CCTTCCCAGG TCTGAACAGC CTCAATACCT TCAAGACGAA ATTCAGCGAG
AACGTGGCGC ACGTGGCGCC CGACCGCGAC CTTCCGCTTC GAAAGGGGTT CTATACCATG
CTGAGCACTG CCAAATCCAC CGTCGCGAGC CATCGCGAGA AGGCTGCCGC CGAAGCGGCC
GCGCCCGCCG CGAAGGGTCC CCGCGAAGAT TTGATCTCCG TCATCATCGG CGGCGACATC
GGAGCCTACG CCCTGGGCCG CGAGATGCAT GAGGCCTTCG GCATCAAGAG CATCTGCCTG
GCATCCGCTC CCATCGGAGC CATCAGCCAT TCGAAGATCT TCGACGTAAA GTTCATCGAG
CGCATCAGCC CCGAAAACAT CATTGCGGCG GCCACCGAGA TCGCCGAGGC CAATCCGGAC
AAGAGCATCT TCCTGTACGG CAACACCGAT TCCACCATTG TGGCCATCAA CGGCGCCCAG
GACCGTCTGC CCGCCAACGT GTACAGCCCC GTGCCGCCTA ACGACGTGGT TGAGCAGGTG
TCCGACAAGG TCACCTTCCA TACGCTGTGC CAGAACGTGG GTATCGACGT GCCCAAGACC
GAAGTGGTCA AACTGGCCGG CACCGACGCC ATTCCCGCAT CCGAAATCCC CTTCCCGTCG
GTGGCCAAGC CGGCCGCCTC GGCGAAGTAC GACCACCTGT ACGCCAAGGG CTTCAAGAAG
GTCTATTACG TACATGAGCA GGCAGAACTC GACCAGCTGT GGAAGGATCT GCGTGAGGTC
GGCTTCGAAG GCGACTTTTT GGTGCAGGAG CTCATCGGCG GCGACGACAC CTGGATGGAC
TCGCTGTCGC TTTACGTTGC CGAAGACGGA ACACCCATCA TGTTCGGCTC CTCCCAGGTG
CTTCTGGAAG ATCACGCGCC CACCATGCTG GGCAATCCCG TGGCCATGAT CACACGCCCC
ATGCCCGAGC ATTGGGAAAA GGCGGCGCGC CTGCTTACCA GCATAGGCTA CAAGGGCTTC
TGCAATATCG ACATCAAGCG CGACCCAGCC ACCGGGCGCG TGCTGTTCCT GGATCTGAAC
CCCCGCATCG GACGCAATTC CTATTACAAC TGCGCTGCGG GCGTCAACCC CATGGAGGTG
GCGGTGCTCG ACCTGATCGA CCATGCGGCC GCCAAGCGGT ACGAGGTCAA GGAGCGCATC
CTGTATACCC TGGTGCCCCT GTCGCTATTG GACGACCGCT ACCTGTCGCC TGAACTGGTG
GCCGAGGTCA ACCAGCTTAA GGCCGAGGGC AAGGTCTTCG ACCCGCAGCG CTACGACAAG
GACGCCGGTA TCCGCCGCAT GATTGACGTC GAGCTTACGG AACGCAACCA GATCCGCAAG
TTCGGCCAGT TCTACCCGAA GGCAACCGAG ACCTCGTTCT AG
|
|---|
| Protein sequence | MMNVKDISFD ELTAHAARLG LALPIEQTEV WARYQETIPG RTPWGVIAVC VGDTPIAFAS
LFKYAMRGYT FLRSHHGLLW AYEPSEQEER DALEAVAKHV HARERGLAFI RFGVLHDLDI
CRPVLSSIPY DTTVVMDISG DQDEIIGRMK KRGRRDVRKA LRESPIVCTD ETEAGMQDFS
EYYDVMRETA ERDGFSPSPM SDYQDMLRIL GPDHVRLFVG RIEGKVVNWE IDTMNDGHAV
RYYAASRSEF ARLLVADRLL LHACVELSRL GCTTLDHMGM GSDAFPGLNS LNTFKTKFSE
NVAHVAPDRD LPLRKGFYTM LSTAKSTVAS HREKAAAEAA APAAKGPRED LISVIIGGDI
GAYALGREMH EAFGIKSICL ASAPIGAISH SKIFDVKFIE RISPENIIAA ATEIAEANPD
KSIFLYGNTD STIVAINGAQ DRLPANVYSP VPPNDVVEQV SDKVTFHTLC QNVGIDVPKT
EVVKLAGTDA IPASEIPFPS VAKPAASAKY DHLYAKGFKK VYYVHEQAEL DQLWKDLREV
GFEGDFLVQE LIGGDDTWMD SLSLYVAEDG TPIMFGSSQV LLEDHAPTML GNPVAMITRP
MPEHWEKAAR LLTSIGYKGF CNIDIKRDPA TGRVLFLDLN PRIGRNSYYN CAAGVNPMEV
AVLDLIDHAA AKRYEVKERI LYTLVPLSLL DDRYLSPELV AEVNQLKAEG KVFDPQRYDK
DAGIRRMIDV ELTERNQIRK FGQFYPKATE TSF
|
|---|
| |