Gene Shel_04800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04800 
Symbol 
ID8394372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp566175 
End bp567104 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content63% 
IMG OID644985243 
Productcysteine synthase A 
Protein accessionYP_003142889 
Protein GI257063217 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID[TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000597368 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.814351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCT ACACATCCGT CGACCAGCTG ATCGGACACA CCCCTCTGCT CGAGCTTACG 
GGCATCGAGA AGGCGTACAG GCTGAACGCC CGCATCGTCG CCAAGCTGGA ATGCATGAAC
CCTGCGGGTT CGGTGAAGGA CCGCATCGCG AAGGCCATGA TCGACCAGGC CGAGGCGGAC
GGTCGCCTGC AGCCGGGCGG CACCATTATC GAGCCCACTT CCGGCAATAC CGGCGTCGGT
CTGGCTTCGA TGGCTGCTGC CCGCGGGTAT CGCCTGATCA TCACCATGCC CGAAACCATG
TCCGTCGAAC GTCGCCTGCT CATGAAGGCA TACGGTGCCG AGCTTGTTCT GACCGACGGG
TCCAAGGGCA TGACCGGAGC CATCGCACGC GCGAACGAAA TCAGCGCCGC CACGCCGAAC
AGCATCGTGG CCGGGCAGTT CGTCAACCCC GCCAACCCTG CCATCCATTT CGCGACCACC
GGTCCGGAGA TTTGGGAAGA CACCGAAGGC AATGTGGACA TCTTCGTCGC CGGCGTCGGA
ACGGGCGGCA CGCTGACGGG CGTGGGCAAG TACCTGAAGT CGCAAAAGCC CGACGTGAAG
GTTGTCGCCG TGGAACCTGC CAGCTCCCCG GTCCTTTCCA CGGGCAAGGC AGGAGCCCAC
AAGATTCAGG GCATCGGAGC CGGATTCATC CCCGACGTGC TGGACACCAA CGTGTATGAT
GAAGTAATCA CCGTGGAAAA CGAAGCGGCC TTCGAAGTGG GTCGGGCCAT CGGTCGCACC
GATGGCATGC TGGCGGGCAT CTCTTCGGGA GCCGCCACAT GGGCCGCCAT CGAACTGGCC
AAGCGCCCCG AGAATGAAGG CAAGACCATC GTGGTGATGC TGCCCGACAA CGGCGAGCGC
TACCTGTCCA CGGCTTTGTT TGCGGAATAG
 
Protein sequence
MTIYTSVDQL IGHTPLLELT GIEKAYRLNA RIVAKLECMN PAGSVKDRIA KAMIDQAEAD 
GRLQPGGTII EPTSGNTGVG LASMAAARGY RLIITMPETM SVERRLLMKA YGAELVLTDG
SKGMTGAIAR ANEISAATPN SIVAGQFVNP ANPAIHFATT GPEIWEDTEG NVDIFVAGVG
TGGTLTGVGK YLKSQKPDVK VVAVEPASSP VLSTGKAGAH KIQGIGAGFI PDVLDTNVYD
EVITVENEAA FEVGRAIGRT DGMLAGISSG AATWAAIELA KRPENEGKTI VVMLPDNGER
YLSTALFAE