Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_04800 |
Symbol | |
ID | 8394372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 566175 |
End bp | 567104 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644985243 |
Product | cysteine synthase A |
Protein accession | YP_003142889 |
Protein GI | 257063217 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0031] Cysteine synthase |
TIGRFAM ID | [TIGR01136] cysteine synthases [TIGR01139] cysteine synthase A |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000597368 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.814351 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATCT ACACATCCGT CGACCAGCTG ATCGGACACA CCCCTCTGCT CGAGCTTACG GGCATCGAGA AGGCGTACAG GCTGAACGCC CGCATCGTCG CCAAGCTGGA ATGCATGAAC CCTGCGGGTT CGGTGAAGGA CCGCATCGCG AAGGCCATGA TCGACCAGGC CGAGGCGGAC GGTCGCCTGC AGCCGGGCGG CACCATTATC GAGCCCACTT CCGGCAATAC CGGCGTCGGT CTGGCTTCGA TGGCTGCTGC CCGCGGGTAT CGCCTGATCA TCACCATGCC CGAAACCATG TCCGTCGAAC GTCGCCTGCT CATGAAGGCA TACGGTGCCG AGCTTGTTCT GACCGACGGG TCCAAGGGCA TGACCGGAGC CATCGCACGC GCGAACGAAA TCAGCGCCGC CACGCCGAAC AGCATCGTGG CCGGGCAGTT CGTCAACCCC GCCAACCCTG CCATCCATTT CGCGACCACC GGTCCGGAGA TTTGGGAAGA CACCGAAGGC AATGTGGACA TCTTCGTCGC CGGCGTCGGA ACGGGCGGCA CGCTGACGGG CGTGGGCAAG TACCTGAAGT CGCAAAAGCC CGACGTGAAG GTTGTCGCCG TGGAACCTGC CAGCTCCCCG GTCCTTTCCA CGGGCAAGGC AGGAGCCCAC AAGATTCAGG GCATCGGAGC CGGATTCATC CCCGACGTGC TGGACACCAA CGTGTATGAT GAAGTAATCA CCGTGGAAAA CGAAGCGGCC TTCGAAGTGG GTCGGGCCAT CGGTCGCACC GATGGCATGC TGGCGGGCAT CTCTTCGGGA GCCGCCACAT GGGCCGCCAT CGAACTGGCC AAGCGCCCCG AGAATGAAGG CAAGACCATC GTGGTGATGC TGCCCGACAA CGGCGAGCGC TACCTGTCCA CGGCTTTGTT TGCGGAATAG
|
Protein sequence | MTIYTSVDQL IGHTPLLELT GIEKAYRLNA RIVAKLECMN PAGSVKDRIA KAMIDQAEAD GRLQPGGTII EPTSGNTGVG LASMAAARGY RLIITMPETM SVERRLLMKA YGAELVLTDG SKGMTGAIAR ANEISAATPN SIVAGQFVNP ANPAIHFATT GPEIWEDTEG NVDIFVAGVG TGGTLTGVGK YLKSQKPDVK VVAVEPASSP VLSTGKAGAH KIQGIGAGFI PDVLDTNVYD EVITVENEAA FEVGRAIGRT DGMLAGISSG AATWAAIELA KRPENEGKTI VVMLPDNGER YLSTALFAE
|
| |