Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_04790 |
Symbol | |
ID | 8394371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 565556 |
End bp | 565966 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644985242 |
Product | transcriptional regulator, BadM/Rrf2 family |
Protein accession | YP_003142888 |
Protein GI | 257063216 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000203075 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.747487 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTTTT CGACTCGCAG CCAGTACGCT TTAAGCGTCA TGGTGGATCT TGCAGAACGG CAAGCCGAGG GGTACACGCC CCTGAAAGAA ATCGCAGACC GACAGGGCAT TTCCGAAAAG TATTTGGAAA GCATTCTGAA AGTCCTGGTC AAAAACGGTT TTCTTATCGG CGTGCGTGGC AAAGGCGGCG GCTACAAGCT GACCCGCAAC CCCGATCTGT ACACGGTTGG AGACGTGCTC CGCCTGACCG AAGACAGCCT GACACAGACT GTAGAGGTAT CCCAGAGCAC CAATGAGAAG ACGGCCGCCA TGTGGAGGGG CCTCGGCGAT GCAATAAACG GTTACCTGGA CAGCGTAACC GTCGCAGACC TGGCCACACC TTCCGATGCC GGCGATTATT ACGTCATTTG A
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Protein sequence | MLFSTRSQYA LSVMVDLAER QAEGYTPLKE IADRQGISEK YLESILKVLV KNGFLIGVRG KGGGYKLTRN PDLYTVGDVL RLTEDSLTQT VEVSQSTNEK TAAMWRGLGD AINGYLDSVT VADLATPSDA GDYYVI
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