Gene Shel_04770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04770 
Symbol 
ID8394369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp564254 
End bp564793 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content59% 
IMG OID644985240 
Productribonucleoside-triphosphate reductase class III activase subunit 
Protein accessionYP_003142886 
Protein GI257063214 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID[TIGR02491] anaerobic ribonucleoside-triphosphate reductase activating protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0269333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.584897 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTATT CGGCCGTGAA ATATTGCGAC ATCGCCAACG GCGAAGGTGT GCGTACATCG 
CTGTTCGTCT CGGGATGTCG CAGGCATTGT CCCTTCTGCT TCAACCCGGA CACGTGGAGC
TTCGATTACG GCGAGGAATT CTCCCAGCAG ATTCAGGATG AAATCGTCGA GAGTCTGCGT
CCGCGTTACA TCCGCGGGCT GTCCCTTTTG GGCGGCGAGC CGATGGAGCC GGAAAACCAG
GCGGGGCTCG TCGATTTCGT CGAGCGGGTC AAGCGTGAGT ATCCTGAGAA ACCTATCTGG
TGCTACACGG GGATGACCTA CGAGGAGCTG CTGGGACGCT GCCGAACGGA AGCGACGGAT
CGGCTGCTGA GCTGCATCGA CATCCTTGTC GATGGGCCGT TCGTGCAGGA CCTCAAGGAC
ATCACGCTCC GGTTCCGCGG ATCTTCGAAC CAACGGATCA TCGACGTTCC GGCGACGCGC
GCAGCAGGCC AGGTGGTTCT GTGGCAGGGC GACCCGGATT TCGCGAAACA TTCCATGTAA
 
Protein sequence
MKYSAVKYCD IANGEGVRTS LFVSGCRRHC PFCFNPDTWS FDYGEEFSQQ IQDEIVESLR 
PRYIRGLSLL GGEPMEPENQ AGLVDFVERV KREYPEKPIW CYTGMTYEEL LGRCRTEATD
RLLSCIDILV DGPFVQDLKD ITLRFRGSSN QRIIDVPATR AAGQVVLWQG DPDFAKHSM