Gene Shel_04660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04660 
Symbol 
ID8394358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp551688 
End bp552122 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content65% 
IMG OID644985229 
Productribosomal protein L31 
Protein accessionYP_003142875 
Protein GI257063203 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0254] Ribosomal protein L31 
TIGRFAM ID[TIGR00105] ribosomal protein L31 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000382809 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.89926e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGAGG GCATCCATCC CGAATATGTC GAGTGCCAGG TTCGCTGCAC CTGCGGCAAC 
ACCTTCATCA CTCGCTCCAC CAAGCGCGAA CTTCGCGTCG ACATCTGCAA CGAGTGCCAT
CCGTTCTTCA CCGGCACCCA GAAGCTGATT GACACCGGCG GACGCGTCCA GCGCTTCGCT
GACAAGTTTG GTGGCGCCGC TGCCGCCGTC GCCGAGCGCG AGGCCGCCAA GAAGGCTGCG
AAGGCTGCTG CCGTCGCTGA GGCCGAGGCC AAGAAGAAGG CTGAGCGCGA AGCCAAGGCT
GCTGCCAAGG CTGCCCGTGC CGCCGAATTC GCCAAGAAGG CTGAGGCTGA AGCCGCTAAG
GCCGCTGCCG CCGCCGAGGC CGCCGCTGCT GAGGCTCCTG CCGAAGAGGC CGCTGAGGAA
GCTGCTGCTG AATAA
 
Protein sequence
MKEGIHPEYV ECQVRCTCGN TFITRSTKRE LRVDICNECH PFFTGTQKLI DTGGRVQRFA 
DKFGGAAAAV AEREAAKKAA KAAAVAEAEA KKKAEREAKA AAKAARAAEF AKKAEAEAAK
AAAAAEAAAA EAPAEEAAEE AAAE