Gene Shel_04170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04170 
Symbol 
ID8394309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp496161 
End bp497042 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content61% 
IMG OID644985181 
ProductFe-S oxidoreductase 
Protein accessionYP_003142827 
Protein GI257063155 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.63469 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTCA CCGAGCCCGT ATACCGCAAC CCCTACTGGC CCACCTGGCC GCTGCTTGAG 
GTCACGCAGG GTTGCACCCA CAACAAGTGC AAGTTCTGCA CGATGTACAA GGGCGTGCGC
TTCGACCTGC GCCCGCTCGA AGATATCGAA GCTGACCTGG CCGAACTGCG CTCCACGGTA
CCGCATGCCC GCACCATCCA GCTGCTGAGC GCCAATCCGC TGGCCCTGCC GTACAGCCGT
TTCAAGCCCA TTCTCGAGAA GATCAACGAG TATTTGCCGG ACATCGAGTT CGTTTACACA
CAGGGACGCG TCACCGACCT GCGCAACAAG ACCGTCGAGC AGTTGCGAGA GCTGCGTGAC
CTGGGCCTGC GCGAGATTTC CATGGGCACC GAGTCGGGTG ACGACTGGAC GCTGGACCGG
GTGAACAAGG GCTACCACGC CGAGGACATC ATCGAGCAGT GCGCCAAGCT GGACGAGGCG
GGCATCCGCT ACTGGCACTC GTTTCTCAAC GGTGTGGCCG GCCGCTCGCA CAGCCGCGAG
CACGCCGTGA ACTCCGCCAA GATCTTCAGC CAGACGAACC CCATGCTCGT GGGCACGGGC
GGTCTCACGC TGTTCCCCGG TACGCCGCTT TTGGAAGAAG CGCAGGTAGG GGAGTTCGAC
CCCTTGTCCG AAAAGGAGAT GTTCGAGGAG CTGCTGCTGT TCGTGGAGAA TCTGACCTGC
GACTGCTCGT TCATCACGCA CCACACCATC GGAGGCGAGA ACCTGAGCGG TCCGAACTTC
CTGGCACGCA AGGACGACAT CATCGCGTCG CTGCGTGACG AGATCGAACA CGGCGATTTG
GACACTATGG CCCGCATCCG CGCGATGAAA CGTTCGCTGT AA
 
Protein sequence
MHFTEPVYRN PYWPTWPLLE VTQGCTHNKC KFCTMYKGVR FDLRPLEDIE ADLAELRSTV 
PHARTIQLLS ANPLALPYSR FKPILEKINE YLPDIEFVYT QGRVTDLRNK TVEQLRELRD
LGLREISMGT ESGDDWTLDR VNKGYHAEDI IEQCAKLDEA GIRYWHSFLN GVAGRSHSRE
HAVNSAKIFS QTNPMLVGTG GLTLFPGTPL LEEAQVGEFD PLSEKEMFEE LLLFVENLTC
DCSFITHHTI GGENLSGPNF LARKDDIIAS LRDEIEHGDL DTMARIRAMK RSL