Gene Shel_03410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_03410 
Symbol 
ID8394233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp412323 
End bp413096 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content67% 
IMG OID644985109 
ProductDNA replication protein 
Protein accessionYP_003142755 
Protein GI257063083 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.896278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGCGC TGGACGAGTC GAGCCCCTAC CTGCGGGCGC AGTCCAACCT CTCCGAGCTC 
AGGCTCGACC GGATGTGCGC GGCCATGCCC GACTACGTGC GCATGGTGGG CGACGGGGAG
CGCGACTTCG CGCAGGCCCT GGCCGAGATG ACGGAGTCCG AGGTGGCCGC CAGGCGCGAG
AGGGTGATGC GCCAGCGGGT GCGCTCGTCG GGCTTTCCCT ACGTCAAGAC GCTCTCGGAC
TTCGACTGGT CGTTCCAGCC GAGCGTGCCC AGGGCCAAGG TGGAGGAGCT CGCGACGCTC
AGGTTCGTCG ACCGGGCGGA GAACGCCCTG TTCGTGGGCA GCCCGGGCGT TGGCAAGACC
CACCTCGCGA TAGCCATCGG CATCGAGGCG GTGAGGGCCG GCCGCGAGGT GCGCTTCGTC
GACTGCGCGA AGCTCGTCGA GGACCTGAAG GACGCGTCCT CGCGCGGGAT ACTCAAGAAC
AGGCTGAAGT ACTACGCGCA CTCCAAGCTG CTGATCATCG ACGAGCTGGG CTACCTCGAC
ATCGACGAGC ACGGCGCGGA CCTCATGTTC CAGCTGGTGT CGACGCGCTA CGAGCAGCGC
TCGACCATCA TCACCACCAA CGTCGGCATC GGCGGCTGGG CGAACGTGTT CGGCGACGAC
GTGGCCGCGA GCGCCATAGC GGACAGGGTC TGCCACCACT GCACGCTGAT AAAGATAACG
GGGAGGTCGT ACAGGCTCAA GGACCTGCCC GCCGACAAGA GGAGGGAGGA CTGA
 
Protein sequence
MAALDESSPY LRAQSNLSEL RLDRMCAAMP DYVRMVGDGE RDFAQALAEM TESEVAARRE 
RVMRQRVRSS GFPYVKTLSD FDWSFQPSVP RAKVEELATL RFVDRAENAL FVGSPGVGKT
HLAIAIGIEA VRAGREVRFV DCAKLVEDLK DASSRGILKN RLKYYAHSKL LIIDELGYLD
IDEHGADLMF QLVSTRYEQR STIITTNVGI GGWANVFGDD VAASAIADRV CHHCTLIKIT
GRSYRLKDLP ADKRRED