Gene Shel_02320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_02320 
Symbol 
ID8394124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp281001 
End bp281654 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content62% 
IMG OID644985003 
Productuncharacterized membrane-associated protein 
Protein accessionYP_003142649 
Protein GI257062977 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.631494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACATCG TCAATTTCTT CGTCTCGCTG CTGAAGGATC CTCGCTCGGC CATCGCGGGC 
TGGATCGTCG CCTTGGGCCC TGTTTGGGTG TACACCCCGC TGTTCCTCAT CGTGTTCGTC
GAGACCGGCC TGGTCTTCTT CCCGTTTTTG CCGGGCGACT CGCTGCTGTT CGCGGCGGGC
GTGTTCTCCG CTCCCGGCGG CGGCCTGCAT CTGGGCGCGA CCTTGGCCGT CTTCTACATC
GCGGCCATCC TGGGCAACAC CTCCAACTAC TGGATCGCCC GGTTCTTCGG TTCGCGCATC
ATCGACTCCG GCAAGGTGAA ATCCCTCACC CCCGAGCGCA TGGCCAAGCT CGACGGCTTC
TTCGAGAAAT ACGGCGGACT GACCATCGTC ATCACCCGTT TCATGCCGTT CTTCCGCACC
TTCGCGCCGT TCATCGCGGG CACGGGCCAT ATGAATTTCG CCAAGTTCAC GCTCTTCAAC
GCCATCGGCG GCATCTCCTG GGTGAGCCTG TTCGTCCTGG TGGGATACTT CTTCGGCGGC
ATTCCCTTCG TGCAGGAGCA CTTCGAGGTC ATCGTTTTAG GCATCGTGGC CGTGTCGGTG
GCTCCCGCCT TCATCGGCGC CGTCAAGGGG GCCTTGGCCG CCCGCAAGAA GTAG
 
Protein sequence
MDIVNFFVSL LKDPRSAIAG WIVALGPVWV YTPLFLIVFV ETGLVFFPFL PGDSLLFAAG 
VFSAPGGGLH LGATLAVFYI AAILGNTSNY WIARFFGSRI IDSGKVKSLT PERMAKLDGF
FEKYGGLTIV ITRFMPFFRT FAPFIAGTGH MNFAKFTLFN AIGGISWVSL FVLVGYFFGG
IPFVQEHFEV IVLGIVAVSV APAFIGAVKG ALAARKK