Gene Shel_02230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_02230 
Symbol 
ID8394115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp273063 
End bp273629 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content65% 
IMG OID644984995 
Producthypothetical protein 
Protein accessionYP_003142641 
Protein GI257062969 
COG category[R] General function prediction only 
COG ID[COG1268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA GAAGCCAATC GGTTGCGTTC TGCGGTCTTG CCATCGCGCT GATCGCTGTG 
AGCGCTTGGG TAACCATCCC GCTGGGTCCC GTGCCCTTCA CTCTGCAGAT TCTGATGCTG
ACCTTGGTGC TGCTGGTGCT GCCGCCCCGC GAGATGGTGG CGGCCATCGT GGGCTACGTG
GCCCTGGGCG CCATCGGCCT GCCTGTGTTC TCGGGCATGC GCGGCGGCAT CGGCGTGGTC
ATGGGCACCA CCGGCGGCTA CATCATCGGC TACGCGGTAG GTGCCTGCCT GGTGGCGCTG
CTCTTCTATT TCTGGAAGGA GCCGGCGAAC AAGAAGGCCC GCTTCGCCCG CGAGATTACG
GCGTCGGCGC TGTTCCTGGT CGTGGTTTAC ATCCTGGGCT GGATTCAGCT GGCGGTTGTG
GCCGACCTGT CGGCAGGTGC GGCGTTTGTC GCCGGCGTGG CCCCGTTCGT CATTCCCGAC
GCCATCAAGA TCGGCGTGGC AACGGTTGTG GCCCATGCCA TCAAGCAGTC GCTGCCGGCG
CTTGGCGCCG CGAAGAAGGT TGCGTAA
 
Protein sequence
MKTRSQSVAF CGLAIALIAV SAWVTIPLGP VPFTLQILML TLVLLVLPPR EMVAAIVGYV 
ALGAIGLPVF SGMRGGIGVV MGTTGGYIIG YAVGACLVAL LFYFWKEPAN KKARFAREIT
ASALFLVVVY ILGWIQLAVV ADLSAGAAFV AGVAPFVIPD AIKIGVATVV AHAIKQSLPA
LGAAKKVA