Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_02200 |
Symbol | |
ID | 8394112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 270313 |
End bp | 271008 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644984992 |
Product | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain |
Protein accession | YP_003142639 |
Protein GI | 257062967 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACC AGCCCAGCAC CATCTTGCTT GTCGACGACG AGCAGTCCAT CATCGATTTC GTCTCCTACA ACCTTCGTAA AGCGGGCTAT CAGGTAGACA CGGCAGAAAA CGGCGACGTC GCGCTGGCCA TGTCGCGCCA CAAGCATTAC GACCTGTACG TGCTGGACAT CATGATGCCC GGCATGAACG GCTACGAGCT GTGCCGCAAC CTGCGCACCC GCACCAACGC GCCGGTGCTG TTCCTTTCCG CCCGCGACTC CGAGCTGGAC AAGGTCGTCG GCCTGGAAAT CGGCGCCGAT GACTACCTGG CCAAACCCTT CGGCGTCCGC GAGCTCATCG CCCGCGTGCG CGCCCTGTTG CGTCGCGGCC AGATGGACGC CGAGCCCATG GCGGGCGAAT CCATCACGGC CGGCGGCATC ACCTTGGACG AGGCACGCCA CATCGCCGAG GGCCCCAACG GATCCATCGA CCTGACCCCC CGCGAGTTCG AGCTGCTGAG CGCCCTTATG AAGGTAGCCG GCAAGGTGGC TTCCCGCGAA GACCTGTTGC GCGAGGCCTG GGGTTGGGAA TACATCACCG AGACCAAGAC CGTCGACACC CACATCAAGC GCCTGCGCGA CAAGCTGGCC GCCGCCGGCT TCGATCCGGG CATCATCGAG ACGGTCCGCG GATACGGGTA TCGCTTCAGG GCATAA
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Protein sequence | MSDQPSTILL VDDEQSIIDF VSYNLRKAGY QVDTAENGDV ALAMSRHKHY DLYVLDIMMP GMNGYELCRN LRTRTNAPVL FLSARDSELD KVVGLEIGAD DYLAKPFGVR ELIARVRALL RRGQMDAEPM AGESITAGGI TLDEARHIAE GPNGSIDLTP REFELLSALM KVAGKVASRE DLLREAWGWE YITETKTVDT HIKRLRDKLA AAGFDPGIIE TVRGYGYRFR A
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