| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_01960 |
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| Symbol | |
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| ID | 8394088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 242962 |
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| End bp | 244434 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644984968 |
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| Product | cell envelope-related function transcriptional attenuator common domain protein |
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| Protein accession | YP_003142615 |
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| Protein GI | 257062943 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00481524 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAATC GCCGACGTAG CGGTTCAGAC TCATATAGCG CTTATTCGCG CCAATCCAAC
ACGCCTTACA GCAGCTCGAA TTACGGAACT TCCGCCCAGG GCGCGGCCGA CCGCTATTCG
CGCCGCACCC AACAGGCGGA ATACGGCAAG CAGATGGAGA AGAAGCGCCG CGGCAAGCGC
GTTCTCACCA CCGTTTTGGT CAGCTTGCTG GTGGTCCTGT TCGCGGGGGC TGCCGCGTTC
GGCGCGTACT ATTTCATGAT CAACAGCAAC CTCCACCAGG AGGTTGACGA GGATTTGGCA
GCTGCCCTGG ACGAGGTGGA AACGCCTACC GACCCCTTCT ACGTGCTGCT GCTGGGTGTG
GACAGGTCCG AATCGCGCGA CGGGTCCGCC GAGTTCGGCG ACGTGTTCCG CTCGGACACC
ATCATTCTGG CCCGCATCGA TCCGACGGAA AAGCAGGCCA CGCTGATTTC CATCGTGCGC
GACACCTATG TGGATATCGA GGGATACGGT CCCAACAAGA TTAATGCGGC CCATGCGTTC
GGTGGCCCGG CTTTGACCGT CAAGACTGTT TCCGAATTCG CTGGCGTTCC CATCAGCCAT
TACGTCGAAG TGGACTTCGA CGGGTTCGAA GCGGCCGTGG ACGCCGTTGG CGGTGTGGAC
GTGGACGTGC CCATCACCAT CGATGACGAT GATGCGGGCG GATACGTTGC GGCCGGCGAG
CAGACCCTCA GTGGCGAAGA GGCCCTGATC CTGTGCCGTG CGCGCCATGC CTACGACGAA
TACGGCGACG GCGACATGTA CCGCGCGGCC AACCAGCGCA TGGTCATCGG CGCTTTGGCC
GAGAAGGTGC TGGCGGCTGA CACCGGCACC ATGCTCAATC TGATTACCGA CATGAGCGAA
TACGTGACCA CCGACATGAG CGTGGCCGAG ATTGCCAGCG TGGCCATGGC CATGCGGGGG
ATGGACACCG ACTCCATCTA CAGCTGCTCC AACCCGACTA CCAGCGCCTA CGAGAACGAC
GTGTGGTACG AGTACAGCAA CAACCAGGCC TGGACCGTCA TGATGCAGCG CGTCGACGCG
GGCCTGTCTC CTACGGGTGA CGACGCCACA TCTTCCAACA ACGGCGGCAT CATCGACGGC
ACCGTGGACT CCGATTACAT TGCCGAAACG GTGCTCGGCG ACGACATGGC CCAGACCGTC
GTCGCGGATG TGGTGGTGCT CAACGGTAAC GGCGTGGACG GCTCGGCGGC CCGCGCGTCC
AGCATCCTGA TGAACAACGG CATGACTGTG GTTTCGACGG GGTCGGCCAA TTCCTACGAG
TACGGCCAGA CCGTGGTGGT GTACAACGAC CCCAGCTTCC GCGACGAGGC CGAAAAGGCC
CAAGGCGCGC TGGGTGTGGG CTACGTCTTC GAAAACGACG GGACCTACGC TTTCACCGGC
GACGTGCTGG TCGTGGTCGG CGCCGACTTC TAG
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| Protein sequence | MGNRRRSGSD SYSAYSRQSN TPYSSSNYGT SAQGAADRYS RRTQQAEYGK QMEKKRRGKR
VLTTVLVSLL VVLFAGAAAF GAYYFMINSN LHQEVDEDLA AALDEVETPT DPFYVLLLGV
DRSESRDGSA EFGDVFRSDT IILARIDPTE KQATLISIVR DTYVDIEGYG PNKINAAHAF
GGPALTVKTV SEFAGVPISH YVEVDFDGFE AAVDAVGGVD VDVPITIDDD DAGGYVAAGE
QTLSGEEALI LCRARHAYDE YGDGDMYRAA NQRMVIGALA EKVLAADTGT MLNLITDMSE
YVTTDMSVAE IASVAMAMRG MDTDSIYSCS NPTTSAYEND VWYEYSNNQA WTVMMQRVDA
GLSPTGDDAT SSNNGGIIDG TVDSDYIAET VLGDDMAQTV VADVVVLNGN GVDGSAARAS
SILMNNGMTV VSTGSANSYE YGQTVVVYND PSFRDEAEKA QGALGVGYVF ENDGTYAFTG
DVLVVVGADF
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