| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_01940 |
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| Symbol | |
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| ID | 8394086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 238990 |
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| End bp | 240705 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644984966 |
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| Product | predicted xylanase/chitin deacetylase |
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| Protein accession | YP_003142613 |
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| Protein GI | 257062941 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000016994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAAT ACAATTCCAA CTTCGGCGAA AACGGATTCC AGCGCGACTG GGATGCCGAC
TTCCGCACCT CGCAACGTCG CAGCGTCGAC CCGTCCCGTC GGGCCCGGCC TTCCGGCTCC
AGCGCGGGTT CCGACTCGCG GACGCGTTCC CAAGGCGCAC GGCGCGCTGC CGGCCCTAGC
GATTCCGCAC GCTCGGGCGC AGGCCACAGC ACCGCCGGCC GCACCGGCAA CCGCATAACC
TACGACGGAC GCACCGGCGC CCAGCGCATG GTTTCCGAAC GTGAGGAACA CGCTGCCCGC
AACACCCGCA ACACCCGGGG CACCGCGGCC GATCGCACGT CGGGCCGCAA CTCGCAGCGC
CCTTCGGCCC GAGGCTCGAA ACGCGCAACG GCCCAGCCGG CCCGTACCCG ACGCGCCGCC
AACGGCAGCC ACGCCTCCCG CGACGGCCAC GTAGCCAACG GCAACCGCAG CGGACGCTCC
GGCGCCCACA ACGTCGCAAC GAAGGACGCC CAGCGCGACA ATTTCGGCTA CAAGAAGGCC
CAGAAGAACC TGCGGGCGGA ATATCGCTCC CGGCGCAACC TGAAGCAGGG TTTCATCGGC
ATCGGCGTTA TCGCCCTGGT CGTGTTCCTC ATCGGCTTCT GGTGGGTCAA CCGCCCGATC
ACCGTCACCG TGAACGACAC GACGGTCCAG CTCAAGAGCG AGAAAATCGC CGATACCGCC
GTGGCCGCCA GCGGATTGAA CCTGACGCCG GGCAATCTGA TCGACGTCGA GGGCGAGATT
CTTGAGGAAG GCGGCGGCAC GCCGTACACG CTGACCATCA ACGGCGACCC CGTCGACGAC
GGCGAGACGA AGCTGCACAA CGGCGACGAG CTCATCGTGG ACGACGGCAC CGACGTCGAG
GAAGAATCCA CCGTCGACAA CAACCACGCC ATCCCCTTCG ACTCCGTCGA GGAGGGCGAC
GGCCCCATCT ACATCGTGAG CCAGCAGGGC AAGAAGGGCG TCGCCGTGGT GAAGACCGGC
AACGTGTCAG GCAAAAGCGT CGTGCTTGAG GTGACCAAAG AGCCGCAAAA CCGCGTCTAT
CTGCGGTACT ATCCCGACGT CGGCTCCGAC AAGGTCATCT GTCTGACCTT CGACGACGGC
CCTTACACGG AGCAGACCGG CGAGGTTCTG GACATTCTGA AGGCAAACGA CGCCAAGGCC
ACCTTCTTCG TCATCGGCGA GCAGCTGACC GGAGAAGCAG GCGACATGGC CCTGCGCGCC
CACAACGAAG GCCACGAGCT GGCCACCCAC ACCTGGGACC ATGCTGCTGG CAGCGGCAAT
GGCGTTGACC TGGGCCTCAT GTCCGAAGAG GAGCAGCGTG ACGAGATTCA GAAGGGCATG
CAGGCCATCA ACGATTTGGT GGGCGAAAAC CAGCTGCCCG TCATGCGCGC TCCCGGCGGC
AACTTCGAGC TGCCCGTCTG GCAGAACGTC GACGACCTGG TTGTGGCCCA GATCACCTGG
ACCATCGACA CCGCCGACTG GTCCCTGCCC GGCTCCGGTT ACATTGCAAG CCAGATTGAA
AGCGCAGGCC CGGGCGACAT CATCCTGATG CACGACGGCG GCGGCGACCG CTCACAGACC
ATCGCCGCGC TCGAGGAGGC CCTGCCCCAC CTGAAGGAGC AAGGCTACCA GTTCATCACC
TGCGAGGAGA TGCTCGAGTA CCCGCCCCTC ACCTAA
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| Protein sequence | MSEYNSNFGE NGFQRDWDAD FRTSQRRSVD PSRRARPSGS SAGSDSRTRS QGARRAAGPS
DSARSGAGHS TAGRTGNRIT YDGRTGAQRM VSEREEHAAR NTRNTRGTAA DRTSGRNSQR
PSARGSKRAT AQPARTRRAA NGSHASRDGH VANGNRSGRS GAHNVATKDA QRDNFGYKKA
QKNLRAEYRS RRNLKQGFIG IGVIALVVFL IGFWWVNRPI TVTVNDTTVQ LKSEKIADTA
VAASGLNLTP GNLIDVEGEI LEEGGGTPYT LTINGDPVDD GETKLHNGDE LIVDDGTDVE
EESTVDNNHA IPFDSVEEGD GPIYIVSQQG KKGVAVVKTG NVSGKSVVLE VTKEPQNRVY
LRYYPDVGSD KVICLTFDDG PYTEQTGEVL DILKANDAKA TFFVIGEQLT GEAGDMALRA
HNEGHELATH TWDHAAGSGN GVDLGLMSEE EQRDEIQKGM QAINDLVGEN QLPVMRAPGG
NFELPVWQNV DDLVVAQITW TIDTADWSLP GSGYIASQIE SAGPGDIILM HDGGGDRSQT
IAALEEALPH LKEQGYQFIT CEEMLEYPPL T
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