Gene Shel_01770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_01770 
Symbol 
ID8394069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp218906 
End bp219511 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content61% 
IMG OID644984950 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_003142597 
Protein GI257062925 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAC TGGGTGTTTT GATTTCTGGA AGCGGCACCA ACCTGCAAGC TATTATCGAC 
GCCATTGCCG CCGGCAAGCT GGACGCGGAG GTGGCCGTGG TCATTTCCAG CCGTCCCGAC
GCGTACGGTC TGGTCAGGGC ACAAGAGGCC GGCATTCAGA CCATCGCGTT GAGCCGCGAC
GTATACACCA ACACCGACAC CGCCAACATG GCCATCGCCA CCGAGCTGAC CCGCGCGGGC
TGCGACTACG TGGTCATGGC CGGCTACATG CGCATGGTGA CCGAGCCCAT CTTGGCCGCC
TTCCCGGACC GCGTCATCAA CCTGCATCCG GCGCTGCTAC CCTCCTTCAA GGGCGCACAT
GCCATCCAGG ATGCCTTCGA CGCGGGCGTG AAGGTGACGG GCGTGACCGT GCACTTCGCA
AACGCAGAAT ACGACAAGGG ACCCATCATC GCGCAGCGTC CGGTGGTCGT CGACGAGGAC
GACACGCTGG ATTCCCTCGA GGCGAAGATT CACGCTGTCG AACACGTGCT GTATCCTGAA
ACGCTGCAGC TGGTGGCCGA GGGCCGCGTC AAAGTTGGTA TTGACCGCAA GGTGCATATT
TCTTAA
 
Protein sequence
MIKLGVLISG SGTNLQAIID AIAAGKLDAE VAVVISSRPD AYGLVRAQEA GIQTIALSRD 
VYTNTDTANM AIATELTRAG CDYVVMAGYM RMVTEPILAA FPDRVINLHP ALLPSFKGAH
AIQDAFDAGV KVTGVTVHFA NAEYDKGPII AQRPVVVDED DTLDSLEAKI HAVEHVLYPE
TLQLVAEGRV KVGIDRKVHI S