Gene Shel_01760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_01760 
Symbol 
ID8394068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp217848 
End bp218903 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content65% 
IMG OID644984949 
Productphosphoribosylformylglycinamidine cyclo-ligase 
Protein accessionYP_003142596 
Protein GI257062924 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0150] Phosphoribosylaminoimidazole (AIR) synthetase 
TIGRFAM ID[TIGR00878] phosphoribosylaminoimidazole synthetase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAAG TCACATACGC AGATGCCGGC GTCGACATCG TCGAAGGCGC GGCGGCCGTA 
GACGCAATCA AGGAGGCCGT GCACTCCACA TACCGTCCCG AGGTCGTGGG CGACATCGGC
GGTTTCGGCG GCATGTTCTC CGCTGCCGCT TTCAAGGGCA TGCAGGATCC CATCATGGTT
TCCGGCACCG ACGGCGTAGG CACCAAGCTG AAGGTGGCCC AGCTGCTCGA CAAGCATGAC
ACCGTAGGCA TCGACCTGGT TGCCATGTGC GTGAACGACA TCCTGGCCTG CGGCGCCGAG
CCCCTGTTCT TCCTGGATTA CGTGGCTGCC GGCAAGATCG AGCGCGAGCA CATCGCCAAG
ATCGTGGGAG GCATCGCCGA GGGCTGCCGC CAGTCGAACT GCGCTTTGAT TGGCGGCGAG
ATGGCCGAGC ATCCAGGCGT CATGGACCCC ACCGATTACG ACCTGTCCGG CTTCACGGTG
GGCGTGGTGG ACCGTCCGAA GATGATCGGT CCCGACAAGG TGCAGGAAGG CGACGTGGTC
GTGGGCCTGG CCTCCACCGG CTTCCATTCC AACGGCTACT CGCTGGTTCG CAAGGTCCTG
GTCGAGGGCA AGACCGCCGA AGAGCTGTCC GTGCCTCGCG ACGATCTGAA CGGCGCCACC
CTGGGCGAGG CGCTGCTGGC GCCCACCCGC ATCTACGTCA AGAGCGTGCT GGCCACGCTG
CGCGAGATGC CCGAGGCCGT GCATGCGCTG GCTCACATTA CCGGCGGCGG CATGACGGAG
AACCTGAACC GCGCGCTGCC TGACAATATG GACGCGCTCG TTGACCGTAC GACCTGGGAT
GTTCCTCCGG TGACGGCGCT GGCCGTGGCC GAGGCGGGTC TGACCAAGGC CGAGGCATAC
AAGACCTTCA ACATGGGTAT CGGCATGGCG CTCATCGTGG CTCCGTCCCA GGTGGACGTG
GTGCGCGAGG CACTGGAGGA GATGGGCGAG AAGACCTACG TCATCGGCTC CATCATCCCC
GGCACGGGCG TCGTCAAATA CGCGGATGAG GACTAA
 
Protein sequence
MAQVTYADAG VDIVEGAAAV DAIKEAVHST YRPEVVGDIG GFGGMFSAAA FKGMQDPIMV 
SGTDGVGTKL KVAQLLDKHD TVGIDLVAMC VNDILACGAE PLFFLDYVAA GKIEREHIAK
IVGGIAEGCR QSNCALIGGE MAEHPGVMDP TDYDLSGFTV GVVDRPKMIG PDKVQEGDVV
VGLASTGFHS NGYSLVRKVL VEGKTAEELS VPRDDLNGAT LGEALLAPTR IYVKSVLATL
REMPEAVHAL AHITGGGMTE NLNRALPDNM DALVDRTTWD VPPVTALAVA EAGLTKAEAY
KTFNMGIGMA LIVAPSQVDV VREALEEMGE KTYVIGSIIP GTGVVKYADE D