Gene Shel_01660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_01660 
Symbol 
ID8394058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp203494 
End bp204351 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content62% 
IMG OID644984939 
Producttransposase 
Protein accessionYP_003142586 
Protein GI257062914 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAGGG AGCTTTCAGG GCAAGGGCAT GCGCTCAAGG ACCTCCTGGC CGCGTCGGGC 
GTCCCGGCGT CGACCTACCA CTACAACAAG CTGAGGCCTG CGAAGCCGCC CACGAGGCCG
GAGCTCTGGG GCAAGGCCGT CGAGATCTTC TCCCGCTCGC CCAACGGCTG CGGCCACCGT
CAGATAGCGA TGTGCCTGCG CGCCGAGGAG GGGGCCGTCA TCGCCGACAA GACGGTGCTC
AAGATGATGC GCGAGATCGG CATCAGGTGC GGCATACGCC GCGAGACCGA CTACCATAAG
TACAACTCCT ACAGAGGCGT CGTGGGCAAG ACCTTCGAGA ACGTGCTGGG GCGCGACTTC
TCGGCGGACG GTCCGTGGCA GAAGCTGGGG ACGGACGTGA CCGAGTTCAA GCAAGGCTGG
GGGAAGGCGT ACTTCGCGCC CGTCTACGAC TTCGGGAGCA AGGAGATAGC CGCCTGGTCG
ATATCGCGGC ATCCGGACCT GGCGCAGCAG GATGAGATGC TCGACATGCT TATCCCGAAG
ATGCCCGAGG GCGCGCATCC GATCATGCAA TCGGACATGG GATGGCAGTA CCAGCACGAC
AGATATTGCG GGAGGCTCGA GAAGGCGGGT ATCGTGCAGA GCATGTCGAG GAAGGGCAAC
TGCATCGACA ACGGCGCGAC AGAGCAGGTG TTCGGTCACG TCAAGGACGA GTTCTTCCGA
GGAAGAGAAT TCCCCGACTT CGACACGTTC AAGAGGGAGC TGGAGGATTA TATCGCCTAC
TGGAACACCC AGAGGAGACA GGTTAAGCTA AAGGGACTGA CTCCGGAGGA GTTCCGGAAC
CAGTCCCTGG TGGCTTAG
 
Protein sequence
MIRELSGQGH ALKDLLAASG VPASTYHYNK LRPAKPPTRP ELWGKAVEIF SRSPNGCGHR 
QIAMCLRAEE GAVIADKTVL KMMREIGIRC GIRRETDYHK YNSYRGVVGK TFENVLGRDF
SADGPWQKLG TDVTEFKQGW GKAYFAPVYD FGSKEIAAWS ISRHPDLAQQ DEMLDMLIPK
MPEGAHPIMQ SDMGWQYQHD RYCGRLEKAG IVQSMSRKGN CIDNGATEQV FGHVKDEFFR
GREFPDFDTF KRELEDYIAY WNTQRRQVKL KGLTPEEFRN QSLVA