| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_01530 |
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| Symbol | |
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| ID | 8394045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 188009 |
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| End bp | 189367 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644984925 |
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| Product | cytosine deaminase-like metal-dependent hydrolase |
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| Protein accession | YP_003142575 |
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| Protein GI | 257062903 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.904881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.929171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTATTA CAGCAGAACA CATCATCCCC GTCACTTCCG ATCCCATCGA GGACGGTGCC
ATTCTGGTTA AGGACGGACG AATTGCCGAA ATCGGCAGCG CCCAGCGCCT GAAGGCCCGT
AATCCGGAGG AGGAAGTGAA GGACTTCGGC AGGGCGGCTC TCATGCCCGG CCTTGTCGAC
CTCCATACCC ATATGGAGTA CACCGTGCTT CGCGGCATCG TCCACGACGT CCCTTACGGC
GAGTGGCTGG CCGAGGAGCA TCGCAAAGCC GACATGCTCA CTTGGGACGA TCGGTATGAT
TCCGCCCTCC TCGGCGGAAT GGAGATGATC TCCGGCGGCA TCACCACCAT TGCGGAGTTC
ACCGGCTCCG GCGCTTCTTG TGAGGCGTTG CAGGACCTGG GCCTTCGCTC CTTCGTATAT
CGCTCCGTCG GTGCGCAGGA GAAGGCGGCC GTCCAGCCGG CTATCGACGC TGCGCTGGCG
GACATCCGCA AATGGCGTGA GAAGGTCGAC CCCGACCGCA CCGTCGTCGG TATCGCACCC
AAGGCGCTGC ATGCATGCCA CCCCACCATC TACCGCAAGG TCAACGAGGT GGCAGAGGCC
GAAGGCATTC CTGTCGCCAT GCATATCGCC GGCAGTTATG AGGAGTACAA CTACGTCATG
AGGGGCACCA TGCCCCTGTC GGTTCGCGGC ATCACTCGTA CGAACGACAA CCTGACCGAC
CGCCCGATGT GGTTGCCCAC CGGCGTGACG CCTGTGAACT ACGCACTCAA CTGGGATGCG
TTCAACAGCG ACGACGTGCT GGCCGTGCAT TGCGTGCATG TGAACGAAGA CGACATCGCC
CGTCTGAAGG AATATGACGT GGCCGTTGCC ATCAGCACCC GCTGCAACGC CCAGCTCGGC
ATGGGCTTGG CGCCGCTGCC CGAACTGCTC CGCGCCGGTT TGCGCGTCGG TTTGGGAACG
GACTCGCCGG CCGCCATCGA CTCGGCGGAC ATGTTCATGG AGATGCGCCT CGGCATGCTC
ATCCATCGTG CCGTCGACCG CAACAGCTTC CTGAGCGCAT CCACCATGCT TGAGCTCGCC
ACCTTGGGCG GCGCCCGCGC ACTGCGTATG GAAAACGAGA TCGGCAGTCT GGAAGTCGGC
AAGCGTGCGG ACATCATTGC CGTGGACCTG GCAAGCTCGC GACAGACCCC GCTGGTCGAT
CCCGTAACGG CGGTCGTTAC CAGCGCTTCG GCATCAGACG TCATTTTCAC TATGGTGCAG
GGCAAGGTGT TGTACGATCG CGGCAAGTAC TCGGGCCATG TGGATCGAGA CGAAGCCATG
CGTAGCGCAA TCCGTATTCG TAGAAGGTTG AGGGACTAA
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| Protein sequence | MIITAEHIIP VTSDPIEDGA ILVKDGRIAE IGSAQRLKAR NPEEEVKDFG RAALMPGLVD
LHTHMEYTVL RGIVHDVPYG EWLAEEHRKA DMLTWDDRYD SALLGGMEMI SGGITTIAEF
TGSGASCEAL QDLGLRSFVY RSVGAQEKAA VQPAIDAALA DIRKWREKVD PDRTVVGIAP
KALHACHPTI YRKVNEVAEA EGIPVAMHIA GSYEEYNYVM RGTMPLSVRG ITRTNDNLTD
RPMWLPTGVT PVNYALNWDA FNSDDVLAVH CVHVNEDDIA RLKEYDVAVA ISTRCNAQLG
MGLAPLPELL RAGLRVGLGT DSPAAIDSAD MFMEMRLGML IHRAVDRNSF LSASTMLELA
TLGGARALRM ENEIGSLEVG KRADIIAVDL ASSRQTPLVD PVTAVVTSAS ASDVIFTMVQ
GKVLYDRGKY SGHVDRDEAM RSAIRIRRRL RD
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