| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_01490 |
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| Symbol | |
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| ID | 8394041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 182308 |
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| End bp | 183534 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644984921 |
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| Product | major facilitator superfamily permease |
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| Protein accession | YP_003142571 |
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| Protein GI | 257062899 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2270] Permeases of the major facilitator superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0591182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.340851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCGC AGAAGATGAC CAAAGCCGAG AAAAGTTGGA TCATGTACGA CGTCGGCAAT
TCCGCCTTCG TCTTGCTCTC GACCGCGCTC ATCCCCGTGT ATTTCGGATC CATCGCAACG
GGCAGCGTCG TGGTGGCCTG GGGCTATGCC GAAACGGTCG CGTCGTTGAT CATTGCGCTG
GCCATGCCGT TTTTGGGCAG CCTGGCCGAC ATGCGCGGCA TGAAGAAGAA GTTCATCGTG
GGCACGGTGG GAACTGGTGC GGTGGCGTGC ATCGCCTTGG GATTCCCGAC GAACGCCATG
GTGTTCTTGG TGATGTACGT CATTGCGGCG GTCATGCTGA ACTCGTCGAT GGTGTTTTAC
GATGCGCTGC TGGTGGACGC AACCACCGAG GACCGCTACG ACGAAGTGTC CAGCCACGGG
TACGCCTGGG GATACGTGGG CAGCTGCATC CCGTTCATCA TTTGCCTGGC CATCGTGCTG
GGGCATGAGT CCATCGGCCT GAGCATGGGC GTGGCCATGA AGCTCGCCTT CGCCATCACG
GCTGTCTGGT GGGTGGCCTT CACCGTTCCG CTGCTGCGCA ACGTGGAGCA GACCCACTAC
AAGAGCCGCC CTGAGCGCAT GATGGCCGAC ACCCTGAAAA GCCTGGTCGA AACCCTGAAG
AACATCTGGG CCGACCGCTC GCTGCGCTTT TTCGTCATCG CGTACTTCTT CTACATCGAC
GGCGTGCACA CCATCATCCG CATGTCCACG AGCTACGGCA CCGACCTGGG CATCAGTTCC
ACGCAGCTGG TGTTGGCCCT GCTGGTCACC CAGTTCGTGG CGTTTCCGGC CGCCATTATC
TACGGCCGTT TGGGCAAAAG GTTCGGCACG AAGAAGATGC TTTTGGTGGG CATCGCCGGC
TACATGTTCA TCACTCTGTT CGCGGCGCTG TTCCTGAAAA CCGCCACGGA ATTCTGGATT
CTGGCCATCA TGGTGGGCCT GTTCCAAGGC GGCATCCAGG CGCTGTCCCG CTCGGGCTTC
GGCAAGCTCA TCCCCAAGGA CCACGCCAAC GAGTACTACG GGTTTTTCGA CATCTTCGGC
AAATACGCCT CGGTCATGGG AACGTTTCTG GTCAGCACCA TCACCATGCT GACCGGCGCG
TCTAGCCTGG GCGTGTTTTC GCTGGTCATC CTGTTTGCCG TTGGGTTCGT CTGCATGATG
CAGGTGGACG GTACCAGGGA AGGATAA
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| Protein sequence | MASQKMTKAE KSWIMYDVGN SAFVLLSTAL IPVYFGSIAT GSVVVAWGYA ETVASLIIAL
AMPFLGSLAD MRGMKKKFIV GTVGTGAVAC IALGFPTNAM VFLVMYVIAA VMLNSSMVFY
DALLVDATTE DRYDEVSSHG YAWGYVGSCI PFIICLAIVL GHESIGLSMG VAMKLAFAIT
AVWWVAFTVP LLRNVEQTHY KSRPERMMAD TLKSLVETLK NIWADRSLRF FVIAYFFYID
GVHTIIRMST SYGTDLGISS TQLVLALLVT QFVAFPAAII YGRLGKRFGT KKMLLVGIAG
YMFITLFAAL FLKTATEFWI LAIMVGLFQG GIQALSRSGF GKLIPKDHAN EYYGFFDIFG
KYASVMGTFL VSTITMLTGA SSLGVFSLVI LFAVGFVCMM QVDGTREG
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