Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_01160 |
Symbol | |
ID | 8394008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 147500 |
End bp | 149410 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644984889 |
Product | chaperone protein DnaK |
Protein accession | YP_003142539 |
Protein GI | 257062867 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.548876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAGA TTTTGGGTAT CGACCTTGGC ACCACGAACT CCGCCATGGC CATCATGGAA GGCAACGAGC CGACCATTCT GGTGAACGCC GAAGGCGACC GCACCACCCC GTCCGTCGAG GGCTTCCGTA AGGATGGCGA GCGCGTCGTC GGCAAGGCTG CGAAGAACCA GGCAGTCACC AATCCGCAGA ACACCGTTTC TTCCATCAAG CGCTTCATCG GCCGCAGCTT CAACGAGACG TCCTCCGAGC GCGAGACCGT CGCCTACAAG GTGGGTCGCG GCAAGGACGG CCGTGCCGTT GTCGACATCG ACGGCAAGGA TTACACCCCC GAAGAGATTT CGGCCATGAT CCTGCAGAAG CTGAAGGCTG ACGCCGAGAA GCAGGTGGGC GCCCCCATCA CCGAGGCCGT CATCACCGTT CCCGCGTACT TCAACGACGC GCAGCGCCAG GCCACCAAGG ACGCCGGCAA GATCGCAGGC CTCGAGGTCA AGCGTATCAT CAACGAGCCG ACGGCCGCTG CTCTGGCCTA CGGCATGGAC AAGACCGAGA AGGATCAGAA GATCCTGGTC TTCGATCTGG GCGGCGGCAC CTTCGACGTG TCCGTCCTGG AGCTCGGCGA CGGCGTCTTC GAGGTTCTGT CCACCGCCGG TGACAACCAC CTGGGCGGCG ACGACTGGGA CCAGCGCGTC ATCAACTGGC TGGCCGACAA GTTCAAGGCT GACAACGGCG GCATCGATCT GACGGCCGAC CCCATGGCCC TGCAGCGTCT GAAGGAAGCA GCCGAGAAGG CCAAGATGGA ACTTTCCTCC ACCACGCAGG CTTCCATCAA CTTGCCCTTC ATCACGGCAG ACGCCACCGG CCCGAAGCAC CTCGACTACA CGCTGACCCG CTCCGAGTTC GAGCGCATCA CCCGCGACCT GCTCGAGCGC TGCAAGCAGC CCGTCGAGCG CGCCCTGCGT GACGCTTCGC TGTCCACCGG CGAAATCGAC GAGGTCATCC TGGTCGGCGG CTCCACCCGT ATGCCGGCCG TCCAGACCCT GGTCCGCAAC ATCACCGGCA AGCAGCCGAA CATGTCCGTG AACCCCGACG AGGTCGTGGC AATCGGTGCG GCTGTCCAGG GCGGCGTCCT TTCCGGCGAC GTCGAGGGCA TCCTGCTGCT GGACGTCACC CCGCTGTCGC TGGGCGTTGA GACCATGGGC GGCGTGATGA CCAAGATGAT CGAGCGCAAC ACCACCATCC CGACCCGCAA GACCGAGATC TACTCCACCG CGGCCGACAA CCAGACCTCC GTGGAAATCC ACGTCCTGCA GGGCGAGCGC CAGATGGCCA ACGACAACAA GACCCTGGGC CGTTTCAATC TGGACGGCAT CCCGGCAGCC CGCCGCGGCG TGCCTCAGAT CGAGGTCACG TTCGACATCG ACGCCAACGG CATCGTGAAC GTTTCCGCTA AGGACCTGGG CACCGGCAAG CAGCAGCAGA TCACCATCTC CGGCTCCACG GCCCTCAACG ATGACGAAGT CGACCGCATG GTTCGCGACG CCGAGGCCCA CGCCGAGGAA GACGCCCGCC GCAAGGAGGA GATCGACACC CGCAACAACT GCGACTCGCT GGTCAACGCC ACCGAGCAGG CGCTGCGCGA GCTGGGCGAC AAGGTTCCTG CCGATACGAA GTCCCAGGTC GAAGCCGCAA TCCAGGAAGC CAAGGACGCT CTGGGCGGCC AGGACATCGA GGCCATCCGC ACGGCAACCG AGAACCTGCA GCAGGCCAGC TACAAGCTGT CCGAGGTTGT GTACAGCACC CAGCAGGCCG GCGGTGCCGA CCCGGCTGGC TACGGCGCAA CCGCCAACCC GGCCGATGAC GGCCCGATCG AGGCTGACTA CGAGGTTGTT GACGACGACG AAAGGAAGTA A
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Protein sequence | MGKILGIDLG TTNSAMAIME GNEPTILVNA EGDRTTPSVE GFRKDGERVV GKAAKNQAVT NPQNTVSSIK RFIGRSFNET SSERETVAYK VGRGKDGRAV VDIDGKDYTP EEISAMILQK LKADAEKQVG APITEAVITV PAYFNDAQRQ ATKDAGKIAG LEVKRIINEP TAAALAYGMD KTEKDQKILV FDLGGGTFDV SVLELGDGVF EVLSTAGDNH LGGDDWDQRV INWLADKFKA DNGGIDLTAD PMALQRLKEA AEKAKMELSS TTQASINLPF ITADATGPKH LDYTLTRSEF ERITRDLLER CKQPVERALR DASLSTGEID EVILVGGSTR MPAVQTLVRN ITGKQPNMSV NPDEVVAIGA AVQGGVLSGD VEGILLLDVT PLSLGVETMG GVMTKMIERN TTIPTRKTEI YSTAADNQTS VEIHVLQGER QMANDNKTLG RFNLDGIPAA RRGVPQIEVT FDIDANGIVN VSAKDLGTGK QQQITISGST ALNDDEVDRM VRDAEAHAEE DARRKEEIDT RNNCDSLVNA TEQALRELGD KVPADTKSQV EAAIQEAKDA LGGQDIEAIR TATENLQQAS YKLSEVVYST QQAGGADPAG YGATANPADD GPIEADYEVV DDDERK
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