Gene Shel_01160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_01160 
Symbol 
ID8394008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp147500 
End bp149410 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content64% 
IMG OID644984889 
Productchaperone protein DnaK 
Protein accessionYP_003142539 
Protein GI257062867 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID[TIGR02350] chaperone protein DnaK 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.548876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAGA TTTTGGGTAT CGACCTTGGC ACCACGAACT CCGCCATGGC CATCATGGAA 
GGCAACGAGC CGACCATTCT GGTGAACGCC GAAGGCGACC GCACCACCCC GTCCGTCGAG
GGCTTCCGTA AGGATGGCGA GCGCGTCGTC GGCAAGGCTG CGAAGAACCA GGCAGTCACC
AATCCGCAGA ACACCGTTTC TTCCATCAAG CGCTTCATCG GCCGCAGCTT CAACGAGACG
TCCTCCGAGC GCGAGACCGT CGCCTACAAG GTGGGTCGCG GCAAGGACGG CCGTGCCGTT
GTCGACATCG ACGGCAAGGA TTACACCCCC GAAGAGATTT CGGCCATGAT CCTGCAGAAG
CTGAAGGCTG ACGCCGAGAA GCAGGTGGGC GCCCCCATCA CCGAGGCCGT CATCACCGTT
CCCGCGTACT TCAACGACGC GCAGCGCCAG GCCACCAAGG ACGCCGGCAA GATCGCAGGC
CTCGAGGTCA AGCGTATCAT CAACGAGCCG ACGGCCGCTG CTCTGGCCTA CGGCATGGAC
AAGACCGAGA AGGATCAGAA GATCCTGGTC TTCGATCTGG GCGGCGGCAC CTTCGACGTG
TCCGTCCTGG AGCTCGGCGA CGGCGTCTTC GAGGTTCTGT CCACCGCCGG TGACAACCAC
CTGGGCGGCG ACGACTGGGA CCAGCGCGTC ATCAACTGGC TGGCCGACAA GTTCAAGGCT
GACAACGGCG GCATCGATCT GACGGCCGAC CCCATGGCCC TGCAGCGTCT GAAGGAAGCA
GCCGAGAAGG CCAAGATGGA ACTTTCCTCC ACCACGCAGG CTTCCATCAA CTTGCCCTTC
ATCACGGCAG ACGCCACCGG CCCGAAGCAC CTCGACTACA CGCTGACCCG CTCCGAGTTC
GAGCGCATCA CCCGCGACCT GCTCGAGCGC TGCAAGCAGC CCGTCGAGCG CGCCCTGCGT
GACGCTTCGC TGTCCACCGG CGAAATCGAC GAGGTCATCC TGGTCGGCGG CTCCACCCGT
ATGCCGGCCG TCCAGACCCT GGTCCGCAAC ATCACCGGCA AGCAGCCGAA CATGTCCGTG
AACCCCGACG AGGTCGTGGC AATCGGTGCG GCTGTCCAGG GCGGCGTCCT TTCCGGCGAC
GTCGAGGGCA TCCTGCTGCT GGACGTCACC CCGCTGTCGC TGGGCGTTGA GACCATGGGC
GGCGTGATGA CCAAGATGAT CGAGCGCAAC ACCACCATCC CGACCCGCAA GACCGAGATC
TACTCCACCG CGGCCGACAA CCAGACCTCC GTGGAAATCC ACGTCCTGCA GGGCGAGCGC
CAGATGGCCA ACGACAACAA GACCCTGGGC CGTTTCAATC TGGACGGCAT CCCGGCAGCC
CGCCGCGGCG TGCCTCAGAT CGAGGTCACG TTCGACATCG ACGCCAACGG CATCGTGAAC
GTTTCCGCTA AGGACCTGGG CACCGGCAAG CAGCAGCAGA TCACCATCTC CGGCTCCACG
GCCCTCAACG ATGACGAAGT CGACCGCATG GTTCGCGACG CCGAGGCCCA CGCCGAGGAA
GACGCCCGCC GCAAGGAGGA GATCGACACC CGCAACAACT GCGACTCGCT GGTCAACGCC
ACCGAGCAGG CGCTGCGCGA GCTGGGCGAC AAGGTTCCTG CCGATACGAA GTCCCAGGTC
GAAGCCGCAA TCCAGGAAGC CAAGGACGCT CTGGGCGGCC AGGACATCGA GGCCATCCGC
ACGGCAACCG AGAACCTGCA GCAGGCCAGC TACAAGCTGT CCGAGGTTGT GTACAGCACC
CAGCAGGCCG GCGGTGCCGA CCCGGCTGGC TACGGCGCAA CCGCCAACCC GGCCGATGAC
GGCCCGATCG AGGCTGACTA CGAGGTTGTT GACGACGACG AAAGGAAGTA A
 
Protein sequence
MGKILGIDLG TTNSAMAIME GNEPTILVNA EGDRTTPSVE GFRKDGERVV GKAAKNQAVT 
NPQNTVSSIK RFIGRSFNET SSERETVAYK VGRGKDGRAV VDIDGKDYTP EEISAMILQK
LKADAEKQVG APITEAVITV PAYFNDAQRQ ATKDAGKIAG LEVKRIINEP TAAALAYGMD
KTEKDQKILV FDLGGGTFDV SVLELGDGVF EVLSTAGDNH LGGDDWDQRV INWLADKFKA
DNGGIDLTAD PMALQRLKEA AEKAKMELSS TTQASINLPF ITADATGPKH LDYTLTRSEF
ERITRDLLER CKQPVERALR DASLSTGEID EVILVGGSTR MPAVQTLVRN ITGKQPNMSV
NPDEVVAIGA AVQGGVLSGD VEGILLLDVT PLSLGVETMG GVMTKMIERN TTIPTRKTEI
YSTAADNQTS VEIHVLQGER QMANDNKTLG RFNLDGIPAA RRGVPQIEVT FDIDANGIVN
VSAKDLGTGK QQQITISGST ALNDDEVDRM VRDAEAHAEE DARRKEEIDT RNNCDSLVNA
TEQALRELGD KVPADTKSQV EAAIQEAKDA LGGQDIEAIR TATENLQQAS YKLSEVVYST
QQAGGADPAG YGATANPADD GPIEADYEVV DDDERK