Gene Shel_00960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00960 
Symbol 
ID8393988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp124516 
End bp125358 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content65% 
IMG OID644984869 
Producthypothetical protein 
Protein accessionYP_003142519 
Protein GI257062847 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0293493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.617405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTCG ATGATTTGAG GCGCATCCGC CAGGCGCTTG ACACCGCCGA CCTGGTGCTT 
ATCGGTGCCA GCAACGGGTT GGACATGGCC GAAGGACTGA ACATCTTCGC GCCGGACGCG
CATTTTGCCG AAGCTTACGG CGACCTGGCG CAGGCCTGCG GCGCCCGTTC CGTTTTGGAG
GGCATGTACC GCAGCCGCGG CAATCTGGCG CAGGCTTGGG CGTGGCAGGC CCGATTCGCC
TGCCGCGAGT GGCTGGACTA CAATCCGGGC GCCGTTATGG AGCCGCTGCG CAAGCTGGTG
GGCCAAACGG ATCACTTCGT GCTGACCTGC AACACGGATG CCCGTTTCAT GCGGGCCGGT
TTCGACGAGG CCTTTGTCAT GCAGACCGAA GGCACCGTGG CACGCATGGT GTGTTCCGCC
AGTTGCTGCG ACGAGCGCCA TGCATCCGCC GAGGCTGTGC GTGCGCTGGA TGCGTCCATT
GCGGAAGGCG CTGTGGACCT GCGGCTCATT CCTGCGTGCC CGCACTGCGG CGCGCCTTTG
ACCCTGGCCG TCGACGAGAT GCGTCTGCAG CATCCCGATT CCGAAATCGC AGGTCAGATG
GATGTGCTTA GGGACCTTCT CGCGCGTCGT CGTGGCGGCA ACATCGTGGT GCTGGAGCTG
GGTGTGGGCC TGCGCAACGG CGTTATCAAG CAGCTGCTGG CCCGGACGGC GGCGGGCGAG
CCGAACCTCA CCTACGCCAT TTTCAACTAC AACCAGGTTG TCTTCCCCCA AGGACTGGAG
GCGCGCTGCG TCGGCGTCGA CGGCGACATG GCGCAGGCCT TCGAAACGAT GGCGCGCCTG
TAA
 
Protein sequence
MRVDDLRRIR QALDTADLVL IGASNGLDMA EGLNIFAPDA HFAEAYGDLA QACGARSVLE 
GMYRSRGNLA QAWAWQARFA CREWLDYNPG AVMEPLRKLV GQTDHFVLTC NTDARFMRAG
FDEAFVMQTE GTVARMVCSA SCCDERHASA EAVRALDASI AEGAVDLRLI PACPHCGAPL
TLAVDEMRLQ HPDSEIAGQM DVLRDLLARR RGGNIVVLEL GVGLRNGVIK QLLARTAAGE
PNLTYAIFNY NQVVFPQGLE ARCVGVDGDM AQAFETMARL