Gene Shel_00940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00940 
Symbol 
ID8393986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp122855 
End bp123397 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content65% 
IMG OID644984867 
Producttranscriptional regulator 
Protein accessionYP_003142517 
Protein GI257062845 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.146478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.42367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAC CGACCCTCGA CCGACGCACC CGCTACACCG TCATGGTGAT CCGCGAGGCG 
TTCTTCGAGC TGTTCCGCGA AGTCGGGTTC AACAAGATGA CCGTGGCCGA CATCTGCCGG
CGCGCCGACA TCAACCGCGG CACCTTCTAT CTGCACTACG AGGATAAGTT CGCCCTGCTG
GACGCGCTGA TCGACGAGGC GCTCGAGGCC GCCCCGCCGC TGGAGGGAAA CGCCCAGGCC
AGCTTGTGCC AGCGGGCCCC CGCCAACGAC GAGTACCTGA TGCTGTACGC CGACGACGAA
GTGTTCTCGC GCATCGCCGC CCGGGTGATC GAACAGGGTG CCCAGCAGAC CGTGCCCTCC
ATTATGGAAA GGACCGGACT GTCCGAACAG GACGCCTACC TGCTGTTCGT GCACAACGCC
TACGGCAACC TGGCCGTGAA CCGTCTGCTG GGTTGGAAGC GCGGCCCCGA GTTCGACCGT
GCGCAAACGC TGCTGAACCT GTATTCGAGC GGCGGCATGG CGGCCCTCAG AAACCGCGCA
TAG
 
Protein sequence
MQEPTLDRRT RYTVMVIREA FFELFREVGF NKMTVADICR RADINRGTFY LHYEDKFALL 
DALIDEALEA APPLEGNAQA SLCQRAPAND EYLMLYADDE VFSRIAARVI EQGAQQTVPS
IMERTGLSEQ DAYLLFVHNA YGNLAVNRLL GWKRGPEFDR AQTLLNLYSS GGMAALRNRA