Gene Shel_00770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00770 
Symbol 
ID8393969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp103150 
End bp103917 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content61% 
IMG OID644984850 
Producthypothetical protein 
Protein accessionYP_003142500 
Protein GI257062828 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCAA AGGTTTTGAA GGCTCTGGTT TTCGGGGCGA CGGCAGCTCT GGCTATGGCT 
TTGGCGGCGT GCACGCAGGC GCCGGCGGCC GGCCCCACGT CGGTGGTGGT GTCGGAAACG
GGCAGCGCCA TCACAGTGAC CGCGCAAAGC GAGGTGAAAG CGGTGCCCGA CAAGGCAAGC
ATCGGCTTAT CCATTGTGGT CCAGGCGGAC ACGAGCGAAG AGGCGCAGGC GCAGGCCGCC
GAAGCGTCCA ATGCCGTAAC GGCTCAGCTC AAAGCGGCGG GCATCGACGA GAAGGACATC
CAGACCGACT GGACGAACTT GAGTCCTATC TATAATTACA ACTACGATGC GAAAACCGGT
GAAGACGTCG AGACCATCAT CGGATACGAG TCCGACACGC ATATCGTTGT GAGCGGTCTT
GAGGTCGACG CAGTGGGCGA TGTGATGCAG ATGGCCGTCG AGGCCGGTGC GACAGGCGTG
GACGGCCCTT CCTATTACTG CAGCGATTAC GATGCGGCCT ATCAGGAGGC CCTGGCCGCA
GCCATGGAGG CGTCGCGTGA GAAAGCCCAA GTTGTCGCCG ATGCCGGAAA TGTCGGGTTG
GGCCAGGTCA TCAATGTGGT CGAAGGACAA CAGGACATGG GCATGAAATA CGCAAGCACC
GGCGTGTATG CCGAAGAGGC CGCCGCGGAT ATGGAAGGGT CCATGGATGT CCAGGCCGGC
GAAGTGACCG TAACCGCCCA GGTCACCGTA AGCTACGCCA TCGCGTAA
 
Protein sequence
MGAKVLKALV FGATAALAMA LAACTQAPAA GPTSVVVSET GSAITVTAQS EVKAVPDKAS 
IGLSIVVQAD TSEEAQAQAA EASNAVTAQL KAAGIDEKDI QTDWTNLSPI YNYNYDAKTG
EDVETIIGYE SDTHIVVSGL EVDAVGDVMQ MAVEAGATGV DGPSYYCSDY DAAYQEALAA
AMEASREKAQ VVADAGNVGL GQVINVVEGQ QDMGMKYAST GVYAEEAAAD MEGSMDVQAG
EVTVTAQVTV SYAIA