Gene Shel_00610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00610 
Symbol 
ID8393953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp78968 
End bp79585 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content58% 
IMG OID644984835 
Producttranscriptional regulator 
Protein accessionYP_003142485 
Protein GI257062813 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.309946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGAAGA ATCTGCCGGA AGCCGAAAAC GGACACGAGG AAAACCTGCG AGATAGCAGC 
ACGAACACGG ATAGCGACCG CGTGCTTGTG ACCAAGCGGG CCGTGTTCCT TGCGCTTTGC
GCCCTGGTGG AGGAACGCGA CTTCAGTGCC ATCACCGCCA GCGACATCAT GAAGCGGGCG
GGCGTTTCAC GATCCACGTT CTACCGTTGC TTCGCAGATA AATACGACGT CGTGAACTGG
TCTTTCAAGC GTTACAAGAA TATCCGCATC CAGGACGTCG AACAATACCA TGATTTCTCG
ACGGCGCTGT ATGCCCAGCT TCTGCATCTG AAGGAATACC GCACCTGCTA CGCGTCGGCG
CTTCGGTATC TGGGGCAGAA TTCGCTGCGC GACTACATGT TCGAGGCCAA CGACGAATAC
ATGTTGGAAT GCTGGCACGC CGAGCACGGC CCCGACGAGG TGTCGCTTGA GAAGCGCGTC
ATGATTCGCT TCGCGGCAGC CGGATGCTCC AAGGTGGTTG AGCAGTGGGT TCTTGGCGGC
TGTGTCGAGG AGCCGCAAAG CGTGGTGGAC GCCCTTGTGG CAACCATACC TACCGAGGTG
CTGGAAACGC TCTTCTAA
 
Protein sequence
MGKNLPEAEN GHEENLRDSS TNTDSDRVLV TKRAVFLALC ALVEERDFSA ITASDIMKRA 
GVSRSTFYRC FADKYDVVNW SFKRYKNIRI QDVEQYHDFS TALYAQLLHL KEYRTCYASA
LRYLGQNSLR DYMFEANDEY MLECWHAEHG PDEVSLEKRV MIRFAAAGCS KVVEQWVLGG
CVEEPQSVVD ALVATIPTEV LETLF