Gene Shel_00290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00290 
Symbol 
ID8393921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp37282 
End bp37962 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content62% 
IMG OID644984803 
ProductK+ transport system, NAD-binding component 
Protein accessionYP_003142453 
Protein GI257062781 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACATTG TCATCATGGG CGGCGGCAAG GTTGGCGAAT ACCTCGGCGG CGTTTTGCTG 
AGCAAAGGTC ACGAGGTGGC CATCATCGAG CACAACCGCA AGACGGCGGA CCGCCTGTCC
ATCACGCTCG AAGGCGAATA CCTGATCATC AACGGCGACG GTTGCGACAC CGCCTACCAG
CAGGACGCGG GCATCCGCAA GGCCGACGTC TTCGTTGCGG TAACCGGCCG CGACGAAGAC
AACCTGGTGG CCTGCGAGCT GGCGACCCGC GTGTTCAACG TGCCGCGCTG CATCGCCCGC
GTGAACAACC CCAAGAACCG CAATATCTTC CGCGCGGTCG GCATCGAAAA CGTGTCGTCC
ACCATTCTGA TCGCCAGCAT GATTGAAGAG GAAGCCCTGA TGGGCGGCAT GGGCGTCGTG
TCCTCGCTGG GGCGCGGCGA CATCGCCCTG ATTGAGGTTT CCATCCCGCG ATCGCCCAGG
CATTTCGACC CGAAAGAGGG CGTGCTTGCG CGGCGGATTC GCATGCCGGA GGGAAGCATC
CTGGCGGCCG TCGACCGTAA AGAGGCAGGC GAGGCCGAGG TTATCGACAA GGAAACCGTG
CTGTACCCCG GCGACAAAGC CGTAGTCCTG GCCGAAACCG ATGCGGTCGA CCAGGTGAAA
GCGCTGTTCA AGAGTTTGTA G
 
Protein sequence
MYIVIMGGGK VGEYLGGVLL SKGHEVAIIE HNRKTADRLS ITLEGEYLII NGDGCDTAYQ 
QDAGIRKADV FVAVTGRDED NLVACELATR VFNVPRCIAR VNNPKNRNIF RAVGIENVSS
TILIASMIEE EALMGGMGVV SSLGRGDIAL IEVSIPRSPR HFDPKEGVLA RRIRMPEGSI
LAAVDRKEAG EAEVIDKETV LYPGDKAVVL AETDAVDQVK ALFKSL