Gene Shel_00280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00280 
Symbol 
ID8393920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp36612 
End bp37271 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content60% 
IMG OID644984802 
ProductK+ transport system, NAD-binding component 
Protein accessionYP_003142452 
Protein GI257062780 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACG TAATCATCGT TGGCTGCGGG CGCGTGGGGT CGCAGCTCGC AAACATGCTT 
TCAAGCAACG ACCGCAACGT ATGCGTCGTG GACATCCAAG CCGAAGCCTT CGCCAACCTG
GGTCGCTCGT TCAACGGCGC CACGTTGCAG GGTTTGGGGT ATGACGAAGA CGTCCTCATC
CGTGCGGGCA TCGAGGATTG CGACACCGTG GCTGCCGTCA CCTCCAGCGA CAACACCAAT
CTGATGGTGG TCGAGGTGGC CCGCCGCATC TACGGCGTGC CCCACGTGAT CGCGCGCCTG
TACAACTCGC GCCGCGAAGA CGCCTACATG AAGCTGGGTT TGGACTACGT ATGCGGAACC
GCCCTGGTGG CAGAGGAAAT CTTCTCCAAA ATCATGGTCG GCCGCGGCAG TCATCTGGAC
AGCTTCGGCG ATTTTGAGAT CATGCGCTTC TCCATCAACC TTGAGCACGT GTCCAACCGT
CAGATCCGCG TGGGCGAGCT GGAGCGCAAC CACGGCGTGC GCATCGTGTG CTTCATCCGC
GCCAAGGACG GCGACAGCTC CATCCCGTCG AAGGACAGCA TCCTGTACGA CGGCGACAGC
GTGGTGGCCT GCATACGCCA CGACCTGCTG CAATCCTTCG GCAAGTTCAT TAAGAAGTAG
 
Protein sequence
MANVIIVGCG RVGSQLANML SSNDRNVCVV DIQAEAFANL GRSFNGATLQ GLGYDEDVLI 
RAGIEDCDTV AAVTSSDNTN LMVVEVARRI YGVPHVIARL YNSRREDAYM KLGLDYVCGT
ALVAEEIFSK IMVGRGSHLD SFGDFEIMRF SINLEHVSNR QIRVGELERN HGVRIVCFIR
AKDGDSSIPS KDSILYDGDS VVACIRHDLL QSFGKFIKK